Poecilia latipinna (sailfin molly): 106937162
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Entry
106937162 CDS
T08005
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106937162 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106937162 (prpf4)
Spliceosome [BR:
plai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106937162 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
PRP4
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
106937162
NCBI-ProteinID:
XP_014874028
Ensembl:
ENSPLAG00000011620
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSDEEDSAPAVKKSRLFYGSLEEKERQRITMETASSATTGSDALKAGIRAGNINISSGET
MEMEERVSERQLEALAEFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRER
LRSVLSVVGPDALKRKDEERAKRSRDECLQTWYHEGPASLKEARLWLARYSLPRSMRRLE
AARALKEVAEATKTIRQQELHKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGL
CKLWSVPDCALIRTLRGHNTNVGAVAFRPQAGVSLDRSDVSLASCAADGTVKLWNLESDE
PVADIEGHSDRVSRVSWHPSGRFLGTTW
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaggaagactcggctccggccgtgaagaagagccgcctgttctacggcagc
ctggaggagaaggagcggcagcgcatcaccatggagacggccagcagcgccaccacagga
agtgatgcactgaaggcgggcatcagagcaggaaacattaacatctcatcaggagagacc
atggagatggaggagcgtgtcagcgagcgccagctggaggcgctggccgagttcgagcgg
cggcgccgagcgcgacagatcaccgtctccaccgacgacgccgaggtgaaggccggcctg
cgagcgctgggagagccaatcacgctgttcggagaggggccggccgaccgccgagagagg
ctgcgcagcgttctgtccgtggtcggtccggacgccttgaagagaaaggacgaagagaga
gccaagaggtcacgggacgagtgtctgcagacgtggtaccatgaaggccccgcctccctg
aaggaagctcgcctctggttggctagatattctctgccacggtcgatgaggcgtctggaa
gctgcacgcgctttgaaggaggttgccgaggcgacaaagacgatccgccagcaggagctg
cacaagtcgctgaggaatctgaacaacttctgcagtcagattggagacgatcggccaatc
agcttctgccacttcagtccggactccaagatgctcgccacggcgtcctggagcggcctg
tgcaagctgtggtcggttccggactgcgccctgatccggaccctgagaggacacaacacc
aacgtgggcgccgtggcgttccgcccgcaggccggcgtctctctggaccggtccgacgtc
agcctggcgtcctgcgccgccgacgggacggtgaagctgtggaacctggagagtgacgag
ccagtggcggacatcgagggtcacagtgatcgggtttcccgagtttcctggcatccgtcc
ggaagattccttggaaccacctggtaa
DBGET
integrated database retrieval system
