Poecilia latipinna (sailfin molly): 106938109
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Entry
106938109 CDS
T08005
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04382
Cornified envelope formation
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04518
Integrin signaling
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106938109
04518 Integrin signaling
106938109
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106938109
09142 Cell motility
04820 Cytoskeleton in muscle cells
106938109
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106938109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plai04147
]
106938109
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106938109
Exosome [BR:
plai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106938109
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106938109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106938109
NCBI-ProteinID:
XP_014875435
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MTRGLRRLRQPAWVVIWLVLYATIQLSDSAACNGCGGSKCDCSGVKGEKGERGFPGLTGQ
PGVPGFPGPEGPIGTRGEKGSDGPSGPSGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPGP
RGVPGCNGTKGEPGFPGSSGIPGRQGLPGPPGLPGEKGDRGDVFYNNNYGQKGSVGLPGL
PGSPGSPGPIGLPGPTGPPGLPGYEGVPGPPGPPGPKGNMGLNFEGPKGDKGDQGLPGPP
GPPGPGQGEQVRPPPTEIQRGDKGDPGPPGLPGDPGNPGPPGPSGGQKGEKGEPGEAGKR
GKQGKDGDPGAPGYPGLKGEPGSPGLPGRDGERGQKGDRGFPGPPGPVIRPTNGAVVGQK
GEPGFPGNPGAKGERGPSGFPGPQGAPGIPGIGGSGPPGPPGFPGDKGQKGDPGTPSNAL
PGPPGRPGNPGNPGPQGARGPPGYSSPIDNCLPGDPGLPGIQGQKGFPGEQGQKGQKGET
CVNCIDGGNLIPGPPGPPGPPGFAGPPGPPGVKGEPGFQGITGLSGPPGVPGPVGAPGFP
GEKGEPGDTFGGGGVKGEKGDSGFPGPPGLPGLDGRPGRDGAPGPPGPKGAPGSLLLKGE
RGPPGDTGPPGIPGDRGPPGGPGYGVPGPPGEKGAQGNSGAPGTSGNPGVKGEPGPTVTE
KGQPGPKGIDGNPGSPGPPGPRGADGQPGSPGFPGPKGEPGQPGVGLPGPAGVKGFPGIP
GQPGTPGKVGRPGVDGFPGPPGFPGPKGEAGFGLPGPPGPPGIAGAKGFPGQKGDPGFPG
NPGGPGRPGFDGGPGLKGEPGSPGQPGPRGPPGSSTSGAQGPPGPPGPPGPMGPIGYPGA
NGEKGDPGPPGLDIPGLPGDRGNPGFPGPPGPIGIPGPPGGPGRDGAPGFPGPKGDMGPM
GPPGPSGGPGTPGGPGAPGLKGEPGFPGSNGIPGGPGSKGEKGDSGSPGLPGPIGPVDIR
GAKGDPGTPGSPGFPGPKGIAGLPGDPGLPGQDGRPGIPGPPGLKGEPGIPGSPGGPGSP
GPKGGMGDMGIPGPMGSKGSPGFQGRPGSPGQPGIPGLQGPKGDPGSGGVGPPGPQGQKG
DPGQPGFPGSPGAKGGPGTPGLPGLPGLPGVKGDVGLAGFQGPPGFPGPKGLDGLPGAPG
LTGAPGRPGESGRSGPPGQVGEKGQPGRDGIPGPAGIKGEPGIPGFGVPGPPGIPGSPGE
KGNPGLPGPTGGPGFPGPKGDTGFPGPPGSPGVSGPPGPPGLPFQGPKGNQGPPGPPGRS
GKGLGWHLSPHGWLDVPAWFSDVRWQKSIKLQHLS
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgactagaggcttgaggcgcctgcgacagcctgcctgggttgtgatttggctcgtactg
tacgccaccatacaactatccgactctgcggcttgcaatggatgtgggggctccaagtgt
gactgcagtggagtgaaaggagaaaagggggaaaggggtttcccaggtcttaccggacag
ccaggggtcccagggttccccggacctgagggaccaatcggaactagaggagagaaggga
agtgatggaccttcgggaccatctggtccaaaaggaataagaggaccatctggattgcct
ggatttccaggaacgccaggacttccaggtctgccaggacaggatggacccccgggccca
aggggagtgccgggttgtaacgggacaaagggtgaacctggttttccaggaagttcagga
atacctggacgacaaggacttccaggtccacctggtctcccaggagaaaagggagaccgt
ggagatgtgttttacaacaacaattatggacaaaaaggatcagtcggtttgcccggattg
ccaggatctccgggcagtcctggacccataggtttaccaggccctactggccctccagga
cttccaggctacgagggtgttccaggtcctccaggtccacctggacctaagggaaacatg
ggtttgaactttgaaggtcccaaaggagacaagggtgatcaagggttgccgggacctccc
ggtcctccaggaccaggtcagggggaacaggtcagaccaccaccaacagagatccagaga
ggagacaagggtgaccctggccctccaggtctaccaggtgacccaggcaacccaggtcca
cctggtccctctggtggccagaagggagagaaaggagaaccaggagaagcaggaaaacga
ggaaaacaaggcaaagacggagacccaggagctccaggatacccaggacttaaaggagag
cctggaagtccaggtctcccaggccgagatggagagagagggcaaaaaggcgaccgagga
tttccgggacctccaggaccggtaattcggcctacgaatggagctgttgttggtcaaaaa
ggtgaacccggttttcctggaaatcctggagccaaaggagaaagaggaccgtcaggtttc
ccagggcctcagggagcaccaggaattcctggaataggtggcagcggtcctccgggtcct
ccaggtttccctggagacaaaggtcagaaaggagacccaggcactccttcgaatgccttg
cccggtcccccaggacgtccgggaaatcccgggaatcctggtccacaaggggcgcgtgga
cctcccggctattcatcaccgatcgataactgccttcctggagatcctgggcttcctgga
atccagggtcaaaaaggtttccctggagagcaaggccagaaaggtcagaagggagaaacc
tgtgtgaactgcattgacggaggcaatcttataccggggcccccagggcctccaggtccg
ccaggcttcgcaggccctcctggcccgccaggtgtaaagggagaaccaggttttcaagga
ataacaggccttagtggaccccctggtgttcctggtcctgtaggtgctccaggtttcccc
ggagagaaaggagagccaggagataccttcggaggtggtggtgtgaaaggagagaagggt
gacagtggtttccctggaccacccggtctgcctggcctggatggtcgacccggtcgtgac
ggagcacctgggcctcctggccccaagggagctcctgggtctctgctcttaaaaggagaa
cgaggtccccctggtgacacaggtccgcccggcatcccaggagacagaggtccaccaggc
ggccctggctatggagtcccgggtccaccaggggagaaaggtgctcaaggcaactcagga
gcacctggcacttccggaaatccaggtgtaaaaggtgaaccaggtccgacggtcacagag
aagggtcaaccaggacccaaaggaatagatggcaacccagggtcacccggtccgccaggt
ccgcgaggtgcggatggacagcctggttcaccaggttttcctggaccaaagggtgaaccg
ggacaaccgggcgtcggccttccaggtcctgcaggagttaagggattcccaggtattccg
ggccagccgggaacacctggaaaagtagggagaccgggagtagatggattccccgggcca
ccagggtttcctggaccaaagggtgaggcaggctttggacttcctggtcctccaggtcca
cctggaatagcaggagctaaaggattccctggacaaaagggagatcctggtttccccggc
aacccaggtggaccagggcgacctgggtttgatggcggaccaggacttaaaggggagccc
ggctcaccaggccaacctggacctcgtgggccccctggaagctcaacaagtggtgcacag
ggtcctccgggccctcctggaccccccgggccaatgggaccaataggatacccaggagca
aatggagagaaaggagacccaggtccaccaggcttagacatcccagggttaccaggtgac
agagggaatcctggttttcctggcccccctggaccaataggaatcccaggaccccctgga
ggacctggaagggacggcgcacctggatttccaggtccaaaaggtgacatgggtccaatg
ggacctccaggaccatctggaggacctggcactccgggaggacctggtgcacctggtctt
aaaggtgaaccaggatttccaggcagtaacggcatcccaggtggacctggttctaaagga
gaaaagggagactcaggttccccgggactcccaggacccattgggccagtagatataaga
ggagctaaaggagatcctggaactccaggatcaccaggctttcccggacccaaaggcatt
gcaggtctccctggtgaccctggattgcctggacaagatggacgccctggcattcctggt
ccgccagggctaaagggagaacctggtatcccagggagtcctggtggtcctggatctcca
ggtccaaaaggcggaatgggcgatatgggaattccaggacctatggggtcaaaaggctca
ccaggttttcaaggtaggccaggatccccaggtcagccaggaatacctggtctccaagga
ccaaaaggtgacccaggttctggtggtgttggaccacctggaccacagggacaaaaggga
gatccaggtcagcccggattcccaggaagtcctggagctaaaggaggtccgggaacacct
ggtcttcctggtttaccagggctaccgggggttaaaggagatgtaggcctcgcaggattc
caaggtcctcctggtttccccggtccaaagggtcttgatggtctgcctggtgcccctggt
ctcacaggagctccaggtagaccaggagagtctggtcgatcaggaccaccaggacaggtc
ggggagaagggtcagccgggaagagatgggatcccaggaccagccggtatcaaaggagaa
ccaggaattcctggctttggtgttccaggtcctcctgggattccagggtcgccaggtgaa
aaaggaaacccaggccttcctggtcctactggaggcccaggatttcctggcccaaaaggg
gacaccggctttccaggtccaccaggttctccaggtgtcagtggccctccaggtcctccg
ggactgccattccagggccctaaaggaaatcaaggacctcccgggccgcctggaagatca
ggtaaaggacttgggtggcacttatcaccacatggttggttggatgttcctgcctggttt
tctgatgtcagatggcagaagtcaataaagctacaacatctaagctaa
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