Poecilia latipinna (sailfin molly): 106938449
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Entry
106938449 CDS
T08005
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106938449 (col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106938449 (col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106938449 (col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plai04147
]
106938449 (col4a6)
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106938449 (col4a6)
Exosome [BR:
plai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106938449 (col4a6)
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106938449 (col4a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106938449
NCBI-ProteinID:
XP_014875987
LinkDB
All DBs
Position
Unknown
AA seq
1656 aa
AA seq
DB search
MGEIGRPGPDGPQGGIGPRGPKGEKGHIGLKGPSGDKGDKGPMGVPGFRGTDGVPGHPGQ
QGSRGPPGKDGCNGTMGDPGLPGYGTGTPGYPGFQGPAGPKGQKGDPIYITDNTEGVPGE
PGPRGPPGLRGPTGPPGFQGPRGINGFPGLPGPPGPQGPEGSRGDIYRGGKGDKGDVGLA
GEPGQPLINVIVEFVGFPKGDKGLQGDPGPKGLKGYPGLPGPPGPFGYRGEYGEQGILGY
PGPRGPAGFVGPPGPSGLKGLPGEPGFLGQPGFIGPKGDQGDIGLPGPPSYFSDGSFVQG
PPGDPGFPGLPGSTGDQGPPGSTGPPGPPGPFRFGGPGAPGFPGGAGPKGDKGNPGLPAY
GPEGFQGPPGPDGPPGPPGPPGPQDSSGRPRDPCDIYPPDRPTGAPSKGPPGNPGPPGQT
GFPGNSGLKGFRGDPGDCNCGGGGGGVGLPGLPGPQGPRGNFGFPGRKGEPGNPGSPGFN
GSPGAPGREGERGFIGRKGQKGESSFSGFGVKGDRGTPGLRGPTGETGNPGRDGLPGFAG
PPGPPGDGGVGTIGEKGFPGFPGGKGRPGAPGDPGFGYPGLPGRRGEKGEPGIPGFPGQP
GPPGPQGDNSCGGVIDAGEGTGDKLPCTIYGEPGDQGERGRPGRPGPQGQPGFPGSPGGR
GFDGAKGQKGDPGFGGLPGPQGFPGPRGDPGVPGIPGVGYDGPKGKDGLPGPPGPKGQPG
EVLGVRPGAPGEAGIPGAPGDKGPPGSPGTPGSPGFDGRPGVSGLKGERGVDGRPGIPGL
PGLPGGAANPIPGPPGSPGSKGLIGPPGCPGYRGRKGEPGEQGFPGPAGMKGTPGFPGPN
GGTGPRGPPGLPGPGTVPGRPGTPGRKGERGFSGLMGFPGRPGRPGSPGFPGGKGFPGDR
GRDGFPGGPGLFGLKGDGGNPGPPGIPGPPSLVQKGAPGVNGAPGFEGFTGPRGDKGLPG
LPGRPGSPGRPGFPVDSKGQAGEPGFPGRPGPPGFPGPKGEGGIMGFPGLTGPRGDDGSP
GFPGNPGEFGRTGAKGPPGETFAYPGAPGVKGQTGDSGFPGSRGIDGSLGDRGFPGRRGP
DGQKGIPGETGRPGTMGPPGIPGPQGQPGFPGRRGSDGSPGPPGGPGDVGFKGLSGAPGL
DGLNGLAGPKGPPGIPGTTIGGDPGPRGAPGQKGERGVSFPGQPGFPGPKGQRGDLGTFG
RPGFPGRPGPPGPSTSSNFPGPVGDPGLPGLDGEYGFQGPPGPPGPPGPGTAQGDTGDPG
LPGFPGIPGPKGETGSPGGPGFPGFPGLKGAPGDNGLAGAPGVKGLPGEPGFFGFKGRRG
SPGRPGRKGAPGIPGPYIPPPAPIGEPGLPGNKGQLGRLGEPGQPGLSGRPGLKGRPGAA
GELGRTGPPGFPGPVGDPGIPGFPGITGDQGFPGAIGRPGIPGGAGRSIGIGYTLVKHSQ
TTNVPMCPQGMAQLWEGYSLLYVEGQEKAHNQDLGQPGSCLPRFNTIPFLYCNPSETCYY
ASRNDKSFWLSTTAPIPMMPVAEEQIRPYVSRCSVCEAPSQAVAVHSQDLTIPTCPRGWR
SLWIGYSFLMHTAAGAEGGGQSLMSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLT
TVDPRLEFGAPTQQETLKGGQERSRVSRCQVCSKIL
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatcggacggcccggaccggatgggccacaagggggcatagggcctcgaggg
cctaaaggagagaagggccacattggacttaaaggaccatctggggacaaaggagacaaa
ggaccaatgggagtgcctggatttcgaggaactgatggagtgcctggtcacccgggtcag
cagggcagcaggggcccaccagggaaggacggctgtaacggaaccatgggggaccccggt
ctgcccggctatggcacgggcactccgggatatcctggctttcaagggccagcggggcca
aaaggtcagaaaggagaccccatctacatcacagacaacaccgagggggtaccaggtgaa
ccaggacccaggggcccacctggtctcagaggtccgaccggcccgccgggtttccaaggt
ccaagaggaattaacggattccccggactccccggccctcctgggccccaagggccagag
gggagccgtggcgacatttatcgaggagggaaaggagacaagggcgacgtgggcttggcc
ggcgagcctggccagccgttgatcaatgtcattgtggagtttgtgggttttcccaaagga
gacaaaggactgcagggtgatcccggcccaaagggattaaaaggataccctggtttacct
ggaccacctggaccttttggttatagaggtgaatacggggaacagggcattctcggatac
ccaggaccaagaggtcctgcgggttttgtcggaccacctggcccttctggactgaaggga
ttaccgggggaaccaggtttcctgggacaaccaggattcataggacccaagggagaccaa
ggtgacatcggactcccaggacctccaagttacttcagtgatggatcttttgttcaagga
cccccaggcgacccggggtttcccggccttccgggtagcaccggtgatcagggacctcca
ggatccaccgggcctccgggaccgccaggccctttccgctttggtggtccaggagctccg
ggttttcctggtggcgccgggccaaaaggagacaagggtaacccgggcttaccagcttac
ggccctgagggtttccaaggtccccctggacctgatggtcctcctggtccccctggtcct
ccaggtcctcaagacagctcaggccggcccagggacccctgtgatatctatcctcctgac
aggcccacaggtgcccccagtaaaggcccccctggaaaccctgggccgcctggccagacg
ggatttccaggaaactcgggacttaaaggctttagaggtgaccccggtgactgtaactgt
ggaggaggaggaggaggtgtcggcctgcccgggttacctggacctcaaggacccagaggc
aactttggcttcccagggcgtaaaggtgagcccggtaacccgggttctcctggtttcaac
ggcagtccgggggcgcctggtcgtgagggtgagaggggattcattgggcgtaaaggacag
aagggggaatcgtccttctccggtttcggggtgaagggagatcgagggacacctggactc
agaggacctacgggtgaaacaggaaaccctggcagagacggtttgcctggcttcgctggc
cccccaggacccccgggtgatggtggtgttggcacaatcggtgagaagggtttcccagga
tttcctggaggcaaaggtcgacctggtgcccctggcgatcctggattcggctaccccggc
ctaccgggccgtcgaggtgaaaaaggagagcctgggatccctgggtttcctggacagcca
ggtccaccaggcccacaaggtgacaacagctgtggaggggttattgacgccggagaggga
acgggcgataagctaccttgcaccatatatggtgaacctggagatcaaggtgaacgtggc
aggcctggacgaccaggcccccaaggccagccaggcttcccaggatcccctggaggtcga
gggtttgatggcgccaagggacagaagggagatcctggttttggaggcctaccaggacca
caaggttttcctggacccagaggagatcccggagttccaggtattccgggagttggctac
gatgggcccaaagggaaagacggccttccaggacctcctggacccaaaggccagcctgga
gaagtcctgggagtaagacctggagctccaggagaggctggcatacctggtgcacccgga
gacaagggcccgccagggagtccaggaacacccggatcacccggcttcgatggacggcct
ggtgtttccggtctgaagggagagcgtggagtggacggccggccgggcattccgggtctt
cccggacttccaggcggcgcggccaatcccatccccggtccacccggatctcccggcagc
aaaggactcatcggaccgccaggctgcccaggttatcgcggtcggaaaggtgaaccggga
gaacaaggattcccgggccctgctggaatgaaaggaaccccgggattccctggtccaaac
ggaggaacaggtccaagaggaccccctggactgccaggtcctggaaccgttcctggaaga
cccggaacgcctggaagaaagggtgaaagaggattctcggggctgatgggtttccccgga
cgaccgggtcgtcccggaagtccaggatttcccggtgggaaagggtttcccggagaccgt
gggagagatgggtttcctggaggtcctggactgtttggactgaaaggtgacggaggaaac
cccgggccccctggtattccaggccctcctagtttagtgcagaaaggtgcaccaggggtc
aacggagcccccggctttgagggctttactggacctagaggtgacaagggtctcccaggc
ctgcctggtcgtccgggttctccaggtcgtcccggcttccccgtggacagcaaaggccag
gccggagagccgggtttccctgggcggcccggcccaccgggcttccctggaccaaagggg
gaaggaggaatcatgggattcccaggattgacgggaccgaggggtgacgacggctcgccg
ggattccccggaaatcctggagaattcggccgaaccggagccaaaggtccacctggagag
acgtttgcctatcctggagcaccgggagtgaaaggccagactggagattcaggttttcca
ggctctcgaggcatcgacggttcccttggcgacaggggttttccgggacgccgaggtcct
gatggacaaaagggcattcccggtgaaacggggcgacccggaacgatgggtccacctggg
atccctgggccgcagggtcagcccggattccctgggagacgaggatcagacgggtccccg
ggaccacccggaggcccaggtgacgtcggttttaaaggtttgtctggagcgccggggctg
gacggactcaatggcctcgccggtccgaaaggccctcctggaatcccaggtacaacaata
gggggagacccaggcccccgcggtgcgccgggacagaaaggagagagaggtgtttccttc
cctggacaaccaggcttccctggaccaaagggacagagaggagatttgggaacttttgga
cgtccagggttccctggacgtcccggacctcctggtccaagtacttcatcaaacttccca
gggccagtgggagaccccggacttcctggattggatggagaatacggtttccagggccct
cccggtcctcccgggccaccgggtcccggcacagcacaaggagacacaggagacccaggg
ctcccagggttccctggaatccccggcccaaagggagaaacaggaagtcctggaggcccc
ggattcccaggcttccctggcttaaaaggagctccgggtgacaacgggctagccggtgct
ccaggtgtgaaaggattgcccggcgagcccggattcttcggattcaaagggcgtcgagga
tcaccggggcgacctggacgtaagggtgctcccggaatcccagggccgtacataccgccc
cctgcacctattggagagcctggtttacccggcaacaaaggacaactcggtcgtctcgga
gagcccggccagcctggtctctctggacgtccaggtctaaagggtcgccccggcgctgcg
ggtgagctcggcaggactggaccgcccggttttcctgggccggttggggatccgggcatc
cctggattcccagggatcactggagatcaaggttttcccggagccatcggtcgtcccggt
attcccggaggcgccggccgcagcatcggcatcggctacactctggtgaagcacagccag
actaccaatgtccccatgtgtccccaaggcatggcccaactgtgggaaggatacagcctg
ctgtacgtggagggacaggagaaggcacacaaccaagaccttggtcagccgggttcgtgc
ctccccaggttcaacaccatccccttcctctactgcaacccatctgagacctgctactac
gcgagccgcaacgacaaatccttctggctctccacgaccgcgcccatccccatgatgcct
gtggccgaggagcagatccggccttacgtcagcaggtgttcagtgtgcgaggctccatct
caggcagtggcggtccacagtcaggacctaaccatccctacctgcccacgcggctggagg
agtctttggatcgggtattccttcctcatgcacacggcagccggcgccgagggcggcggt
cagtccctgatgtctcccggctcttgcctggaagacttccgagcgaccccgttcatcgag
tgcaacggcgccaggggcacctgccactacttcgccaacaagtacagcttctggctcacc
acagtcgacccccggctggagtttggcgcgccgacgcagcaggagaccctgaagggcggt
caggaacgctccagggtcagccgctgccaagtctgcagcaagatcttgtag
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integrated database retrieval system
