Poecilia latipinna (sailfin molly): 106938834
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Entry
106938834 CDS
T08005
Symbol
msh3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106938834 (msh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plai03400
]
106938834 (msh3)
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106938834 (msh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MACPF
Motif
Other DBs
NCBI-GeneID:
106938834
NCBI-ProteinID:
XP_014876501
Ensembl:
ENSPLAG00000005284
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MPKSVKKPCTTQTSISRYFGGLSSSSSRPQCGIKPNPAEHRLSRGKLKLSSGDEDGLPSK
RTKLAVKGHQVEDVQCEPGPSQSVKEAKPTLNRGGGGEGGGRGGLCSSTLEKLKGFSCMM
ADPFLRAIEDETKMDDRSGKSSNMRSSVSPSFVDSHQQISKTLPGTEKKRDYETQNHDEE
DPELAVTNLGFCLSKITKSGGREGGKVAESPSDSSAPCRRSRSTYTPLEQQVMELKQQHK
DVLLAVECGYKYRFFGEDAEIAAKELNITCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKV
GVVKQTETSALKASGTNRNALFSRQLSALYTKSTLVGEDVNPVCRVADVEEGGCADVVSD
PPDSFLLCISENWDKVKKQLSVGVVAVQPSTGDVFLDCFPDGPSRSELEGRILRINPVEV
LVPSDLSDQTSKLLLSIANASAQTDDRIRVERRDSAEFEFTSAMNAVVKFYCHTPEKDSR
SLSSVASFDSPVICCLGPLIQYLQEFNLERVLRNESSFRHLSSESGGMKLSAATLRNLEI
LNNQTDGSVRGSLLWVLDHVRTPFGRRLLRKWVSQPLTEPQCIAERQDAVQEMMESDSIT
LNSIRSLLSHLPDLERGICSIYHGKSSTQEFFLICSSLSRLGLELQALLPAVQAQIRSSL
LRSLLLDTPDLLAPAHGFLKVLNEKAAKSGNKTELFSDLSGFPTLQERMNQIQSVLAEIQ
AHRKEVRLVLKAPALDYVSVSGQEFLIEVKNSLSTIVPPDWVKISSTKTVSRYHSPLLVE
RYKKLQQLREQLLLDCQREWTRFLDQFGEHYHTMKRAISHLATTDCLLSLAEVAKQGNYC
RPKVCENNHQIMITDGRHPAIDLLMGEHGQYVPNHTTLQRDSKRTMIITGPNMGGKSSYI
RQVALICVMAQMGSYVPAREACLGVLDGIYTRMGASDNIFKGRSTFMEELTEASEIISQA
TERSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSFTLFVTHYPPLCELEQVFPQHVS
NFHMAFLLTEPDVTTDDGEVQPEFITFLYQLTKGAAGRSYGLNVARLADVPDPILHTASH
KARELESLVNARRKYKKLLSALWSICDKSSLEKWLQSNS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtctgtgaagaagccctgcactactcagacctccatcagcaggtactttgga
ggactgagcagcagcagcagcagacctcagtgtgggattaaaccaaatcctgcagagcat
cggctctcaagaggaaagttgaaactttcctctggtgatgaagatgggttgccatcaaaa
cgaaccaaactggctgtgaagggccaccaggtggaagacgtgcagtgtgagcccggacct
tctcagagtgttaaagaggcaaagccgacattgaaccgaggaggaggaggagaaggagga
ggacgaggaggtctctgctcctccactttggagaagctgaaaggtttctcctgcatgatg
gctgatccatttctccgggccatcgaggacgaaacaaagatggatgaccgcagcggcaaa
agctctaatatgaggagttctgtttcgcctagttttgtggattctcatcagcaaatcagc
aagacactgcctgggacagagaagaagcgggattatgaaacacagaatcatgacgaagag
gatccagagctggctgtcactaatctgggattttgcttgtctaagatcacaaagtcagga
ggaagggagggaggcaaggttgcagagtctccatcagactccagcgccccctgcagacgc
tccagaagcacatacacccccctggagcagcaggtcatggagctgaaacagcagcataag
gacgtgctgttggcagtggagtgtggctacaaatacaggttctttggagaagatgcagag
attgctgccaaagagctgaacataacttgtcacctggatcataacttcatgacgtgcagc
atcccgactcaccgcctgtttgttcacgtcaggcgcctggtgtctcatggacacaaggtt
ggcgttgtgaagcagacagaaacgtctgcgctgaaggcgtcagggaccaacagaaacgct
ctgttcagccgtcagctcagcgccttgtacaccaagtccactctggtgggagaggacgta
aacccggtctgtagagtggcagacgtggaggaggggggctgtgctgacgtggtgtcggac
cctcctgacagcttcctgctgtgcatcagtgagaactgggacaaagtgaagaagcagctc
tctgtgggggtggtggccgtccagcccagcactggagacgtgttcctggactgtttccct
gatggtccgtcccgctccgagctggagggccgtatcctgaggataaacccagtggaggtt
ctcgtgccttcggacctttcggatcaaacctccaaactgctgctcagtatcgctaatgcc
agtgctcagactgatgaccgaatcagagttgagaggagggacagcgctgaatttgagttc
acctctgcaatgaacgcagtcgtcaagttctactgtcacaccccggagaaagactcgcgc
tctctgtcgagcgtggcctccttcgacagcccggtcatctgctgcctggggccgctcatc
cagtacctccaggaattcaatctggagagggttcttagaaacgaaagctcatttcggcat
ctgtccagcgaatcaggggggatgaagctgagtgctgccactctcaggaacctggaaatc
ctcaataatcagacagatgggagcgtgaggggaagtctgttgtgggtgttggaccacgtt
cgcactccgtttggacggagactgctgaggaagtgggtcagccagccgctcacagagccg
cagtgtatagcagaaagacaggatgctgtgcaggaaatgatggagtcagactcgataact
ctgaactccatcagatctctgctgtcacatttgcctgatctggagagaggcatctgcagc
atatatcatggaaagtcttccacacaggagtttttcctcatctgcagcagtctttctcgc
cttgggctggaactgcaggctctactcccagctgtccaggcgcagatccgctcctcgctg
ctccggagcctcttattggacactcctgacctgctggctccggcccatggcttcctcaag
gtgctcaatgagaaagcagcaaagtcggggaataagacggagctcttctcagatttgtct
ggcttcccgacgctgcaggaaaggatgaaccaaatccagtctgtcctcgctgaaattcaa
gcccaccgcaaagaggtccggttggtgctgaaggcccccgcgctcgattacgtctcagtt
tctggacaggagtttctgattgaggtgaagaactcgttgtcaacaatcgttccacctgac
tgggtcaaaatcagcagcacaaagactgtcagcaggtatcactctcctctcctggttgaa
cgctacaagaagctgcagcagctccgagagcagctgctgctcgactgccagagggagtgg
acccgatttctggatcagtttggggagcactaccacaccatgaaaagagctattagtcac
ctagcaaccacggactgcctcctttcattggctgaggtggccaaacaagggaattattgc
aggccaaaggtgtgtgaaaataatcaccagataatgatcactgatggcagacatcctgcg
atagatttattgatgggagagcatggccagtatgttcccaaccacaccacattacagcgt
gacagcaagagaactatgataatcacagggcccaatatggggggcaagagctcctacatc
cgccaggtcgcccttatctgcgtgatggcccagatgggctcgtacgtcccggcgcgtgag
gcctgtctgggcgtactggacggtatttacaccagaatgggggcttcggacaacatcttc
aaaggccgcagcacattcatggaggagttgacggaggcctcagagatcatatctcaagca
acagaacgatcgttggtcatcctcgatgaactcggacggggcacaagcactcatgacggc
attgccattgcctacgctaccctggaatacttcatcagagatgtgaagtccttcaccttg
tttgtgacccattatcctcctctgtgtgagttggagcaggtgtttcctcagcatgtgtcc
aacttccacatggctttcttactcactgagcctgacgtcacaactgatgatggagaggtt
cagccagagttcatcaccttcctctatcagctaaccaaaggagctgcggggcgaagctac
ggcctgaacgtggcccgactagctgacgttcctgacccgatactgcacaccgcctctcat
aaagcccgagagctggagagcctggtcaacgccaggaggaagtataagaaacttctctca
gctctttggagcatctgcgacaaatcctccctcgaaaagtggctgcagtcgaactcttga
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