Poecilia latipinna (sailfin molly): 106939775
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Entry
106939775 CDS
T08005
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai02010
ABC transporters
plai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106939775
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106939775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plai02000
]
106939775
Transporters [BR:
plai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106939775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
106939775
NCBI-ProteinID:
XP_014877802
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MSRMIWQALKPLLLGKILYTPNTPATQRIIHEVNRTFQELGVFRDLGGMWEEMRPRVWEF
MESSQQMDVIRTLLKNNVTASFFHAQLAGTDWTVADVANFLSTQPAELPSGALTWREVFN
ETDQAIMSISRFMECVNLDKLEPVSTEERLVNRSMVLLEDRKFWAGIVFPDIGPNTTELP
PKVNYKLRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFLYLQDIIEQGIVRALT
GIKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVSIILKSVVYEKEARLKE
TMRIMGLDNGILWLSWFISSLVPLLISAALLVLVLKKGNLLPYSDPGIIFVFLGSYAVVT
IMQCFLISTMFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGYGVKVFASLLSPVTFGF
GCEYFALFEEQGVGIQWKNLVSSPLQEDEFSLRTTIIMMYFDSFLYGVLTWYIEAVFPGQ
YGIPRPWYFPFTKSYWFGEEGKSNKLPLNRKGNAAAVCVEEEPAHLEPGVYIENLVKVYR
HGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRTDLS
AIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVSAEIEHILQDTGLPHKRFSRT
STLSGGMQRKLSVALAFVGGAKVVILDEPTAGVDPYARRGIWDLLLKYRQGRTIILSTHH
MDEADILGDRIAIISHGKLCCVGSSLYLKTQLGTGYYLTLVKKEAEPSLSSCRNSSSTVS
FTKKDEESDSVSSSDAGLGSEHESEAAAIDHAAATCTPPDSSCVSGLILRHVPAARLVED
LGHELTYVLPYSAAKDGAFVALFRELDLKLQELGISSYGVSDTTLEEIFLKVAEDNGVDT
EVPSDGTLPVWRRRRTHAFGGGDHQSCLRPNTEDDNDCNDSDGDADCRETDCLGGTEGKG
SVQVMGWSLKRQQFVALMWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYP
SLELQPWMYEDQVTFFSDDAPGDANMQKLLNALLDPPGFGTRCMDGYSIREAPCTMGDDD
WSTPPVSDDVQQLFSSRNWTMEHPSPACSCTCDGRKRMLPDCPAGAGGLPPPEMKLSSSD
TLQNLTGRNVSDYLVKTYADIIGKSLKNKVWVNEFRYGGFSLGARSTQVLPAANEVDDAI
ERVRKVFELQKGSAADRFLDNLSGFINGLDTKNNVKIWFNNKGWHSVASFINVMSNGVLR
ANLPPGAEPGRYGITSFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVSKAKHMQFISGVHPLLYWLANFTWDMCNYCVPATLVILIFICFQQKAYVSSSNL
PVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSISTFVMELFGDHE
IGGINDILKNVLLVFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLDWDMVGKNLFA
MAVEGVVFFIITILIQYRFCIKPRPVSKLTKLGPLGEEDEDVARERHRIVQGLGQGDILE
LRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTLVTSGEAFLA
GKSILREIEDVHRNMGYCPQFDAINELLTGREHLELYAILRGVPEGEVCDVAEWGIRKLS
LLKYADKRAGSYSGGNLRKLSTAISLIGAPPVVFLDEPTTGMDPRARRALWNCIHSVIKQ
GRSIVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLR
PVMKFIESELVGSTLKEKHRNMLQYQLPSSLSSLAHIFSTFANNKDALRIEDYSVTQTTL
DQVFVNFAKDQSDDYLSKDASVRRKEVIIDVPAPSSACGGAESESVM
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatgatctggcaggccctgaagcctctgctgctggggaagatcctgtacacc
cccaacaccccggccacccagaggatcatccacgaggtgaaccggaccttccaggagcta
ggtgtgttcagggacctgggcggcatgtgggaggagatgagacccagagtgtgggagttc
atggagagcagtcagcaaatggacgtaatcaggactctgctgaagaacaacgtcaccgcc
agcttcttccacgctcagctggccggcaccgattggaccgtggccgacgtcgccaacttc
ctgtccacgcagccggcagagctgcccagtggcgccctcacctggagggaggtgttcaat
gagaccgaccaagccatcatgagcatttctcgcttcatggagtgtgtgaacttggacaag
ctggagccagtgtccactgaggagcggctcgtcaaccgctccatggttctgctggaggac
cggaagttctgggccgggatcgttttccccgacattggacccaacaccaccgagctgccg
ccaaaggtcaactataagctgcgcatggacatcgacaacgtggagcggaccaacaagatc
aaagacgcttactgggacccgggtcctcgggccgatccgtttgaggacatgcggtacatc
tggggcgggttcttgtacctgcaggatatcattgagcaaggcatcgtcagagcgctgacc
ggcatcaaggagaagaccggcgtctacatccagcagatgccgtatccgtgctacgtggac
gacatcttcctgcgggtgatgagccgctccatgccactcttcatgacgctggcctggatg
tactcggtgtccatcatcctgaagagcgtggtgtacgagaaggaggcgcggctgaaggag
accatgaggatcatgggcctggacaacggcatcctgtggctgagctggttcatcagcagc
ctggttccgctgctcatcagcgctgcactgctggttctggtcctgaagaaggggaacctg
ctgccctacagtgaccctggcatcatcttcgtcttcctgggatcgtacgccgtggtcacc
atcatgcagtgcttcctcatcagcaccatgtttgctcgcgccaacctggccgccgcctgc
ggaggcatcatctacttcaccctctacctgccctacgtcctctgcgttgcctggcaggac
tacatcggatacggagtcaaagtgtttgctagcctgctgtcccctgtgacctttggcttc
ggctgcgagtactttgcgctgtttgaggagcagggtgtcgggatccagtggaagaacctg
gtgtcgagtcctcttcaggaagacgagttcagcctccgcaccaccatcatcatgatgtac
tttgactccttcctgtacggagtcctcacctggtacatcgaggccgtgtttccaggtcag
tacggcatccctcggccctggtacttccccttcaccaagtcctactggtttggagaggag
gggaagtccaacaagcttccactgaaccggaaaggaaacgctgcagctgtgtgtgtggag
gaggagccggcccacttggagccgggagtctacatcgagaacctggtgaaggtttaccgt
cacggaaagaaactggctgtggacggactgactctgggattctacgagggacaaatcacc
tcctttctgggacacaacggcgctggaaagaccaccaccatgtccatcctgaccggcctg
ttcccgccgacctccggcaccgcctacatcctggggaaggacatccggacagatctgagc
gcaatcaggcaaagcctgggcgtctgtcctcagcacaacgtcctcttcagcatgctgacg
gtggaggagcacatctggttctacgcgcggctcaaagggctgtcagaggagcaggtgtcg
gctgagatcgagcacatcctgcaggacacggggctgcctcacaagcggttctccaggacc
agcacgctgtctggcggcatgcagaggaagctgtcggttgccctggccttcgtcgggggg
gccaaagtggtgatcctggacgagcccacggccggagtcgacccctacgcccgcagaggc
atctgggacctgctgctgaagtaccggcagggccgcaccatcatactgtccacccaccac
atggacgaggcagacatcctgggggaccgcatcgccatcatctcacacggcaagctgtgc
tgcgtgggctcgtctctgtatctgaagacgcagctggggacgggatactacctgacgctg
gtgaagaaggaggcggagccgtcgctcagctcctgcaggaactcgtccagcaccgtgtcc
ttcaccaagaaggatgaggagagcgactcggtcagcagtagcgacgccggactcggcagc
gaacatgaaagtgaggcagccgctatcgaccacgctgccgccacctgcacaccgccggat
tcttcctgcgtctccggcctcatcctgcgccacgtcccggccgcccgcctggtggaggac
ctgggccacgagctgacctacgtcctcccatacagcgccgccaaggacggcgccttcgtg
gcgctcttcagagagctggacctgaagctgcaggagctgggcatctccagctacggcgtg
tccgacactacgctggaggagattttcctgaaggtggctgaagataatggagtggacact
gaagtaccatcagatgggacacttcctgtttggcggcgcaggaggactcatgcctttgga
ggcggcgaccatcagagctgcctgaggccgaacaccgaggatgacaatgactgcaacgac
tccgatggagacgccgactgcagggagacggactgtctgggcggcaccgaggggaaaggt
tcggtccaggtgatgggttggagcctgaagaggcagcagtttgtggcactgatgtggaag
cgcttcctgtacgcccggcgctccaggaagggattctttgctcagattgtccttccggcc
gtgtttgtctgcatcgcgctggtcttcagcctcattgtccctccgttcgggaagtacccc
agcctggagctgcagccctggatgtacgaggaccaggtgactttcttcagcgatgacgca
ccaggagacgccaacatgcagaagttactgaatgctctgttggacccgccgggcttcggg
acgcgctgcatggacgggtactccatccgggaggcgccctgcaccatgggggacgatgac
tggagcacccccccggtctctgacgatgtccagcagctgttcagctccaggaactggacc
atggagcatccgtcaccggcctgctcctgcacctgcgacggcaggaagaggatgctgcct
gactgcccagcgggagccggtgggctaccgccacctgagatgaagctgagcagctcagac
actctgcagaacctgacaggacggaacgtctcggactacctggtgaagacgtacgctgac
atcatcgggaagagcctgaagaacaaagtgtgggtcaacgagttcaggtacggaggcttc
tcattgggcgccaggagcacacaggtccttcctgcagccaatgaggtcgacgatgccatc
gagagagtccgaaaggtctttgagttacagaagggttctgctgctgaccggttcctggac
aatctgtccggcttcatcaacggcctggacaccaagaacaatgtgaagatctggttcaac
aacaaaggttggcacagcgtggcgtccttcatcaacgtgatgagcaacggcgtcctgaga
gccaacctgccgccaggtgcagagcctggtcgctatggcatcacttccttcaaccacccg
ctcaacctgaccaaggagcagctgtcccaggtggcgctggtaacaacctcggtggacgtc
ctggtgtccatctgtgtgatcttcgccatgtccttcgtcccggccagcttcgtagtcttc
ctcatccaggagcgcgtcagcaaagccaaacacatgcagttcatcagcggcgtgcatccg
ctgctctactggctggccaacttcacctgggacatgtgcaactactgtgtcccggcaacg
ctcgtcatcctcatcttcatctgcttccagcagaaagcctacgtctcctccagcaacctg
ccggttctggcactgctgctgctgctctacggctggtccatcacgcccctcatgtacccg
gcctccttcttcttcaagatccccagcacggcctacgtggtcctgaccagcgtcaacatc
ctcatcggcatcaacggcagcatctccaccttcgtcatggagctgttcggcgaccacgag
atcggcggcatcaacgacatcctgaagaacgtcctgctggtcttccctcacttctgcctc
ggccgcggcctcatcgacatggtgaagaaccaggcgatggccgacgcacttgagagattc
ggtgagaacaggttccggtcgcccctggactgggacatggtgggaaagaacctgttcgcc
atggcggtggagggcgtggtcttcttcatcatcaccatcctcatccagtacaggttctgc
atcaagcccaggcctgtcagtaaactcaccaaactgggaccactgggagaggaggacgag
gacgtggcgcgcgagagacaccgcatcgtccagggcctgggacagggggacatcctggag
ctccggcagctcaccaaggtgttcaagcggaagcagaagccagcggtggaccggctgtgt
gtcgggattcctcctggagagtgcttcggtctgcttggtgtgaatggagctgggaaaacc
acaaccttcaagatgctgacaggagacaccctggtgaccagcggagaggccttcctggcc
ggcaagagcatcctgcgggagatcgaggacgtccaccgaaacatgggctactgccctcag
tttgacgccatcaacgagctgctgacaggaagagagcacctggagctgtacgccatcctc
agaggcgtcccagagggggaggtctgcgacgtggcggagtggggcatcagaaagctgagt
ctcctgaagtacgccgataagagagcaggaagctacagcggaggaaacctgaggaagctg
tccactgccatttctctgatcggagcgccccctgtggtcttcctggacgagccgaccaca
gggatggaccccagggcccgacgggccctttggaactgcatccacagcgtcatcaagcag
ggccgctccatcgtcctcacctcacacagcatggaggagtgtgaggctctctgcaccagg
atggccatcatggtgaacggcaggttccgatgtctcggcagcgtccaacacctgaagaac
aggttcggggacggctacaccatcatcctgcgggtggcggggcccgacccggacctgcgt
cccgtcatgaagttcatagagagcgagctggtcggcagcacgctgaaggagaagcaccgc
aacatgctgcagtaccagctgccctcctccctctcctcgctcgcccacatcttctccacc
ttcgccaacaacaaggacgcgctgcgcatcgaggactactctgtcacccagaccacctta
gaccaggtgtttgtgaactttgcgaaggatcagagtgacgactacctgtccaaagacgcg
tcggtgaggcggaaggaagtgatcatcgacgtcccggcaccgagctccgcctgcggcggt
gcggaaagcgagagcgtcatgtga
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integrated database retrieval system
