Poecilia latipinna (sailfin molly): 106941509
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Entry
106941509 CDS
T08005
Symbol
patl1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106941509 (patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106941509 (patl1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106941509 (patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
106941509 (patl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
LRR_RI_capping
Motif
Other DBs
NCBI-GeneID:
106941509
NCBI-ProteinID:
XP_014880045
Ensembl:
ENSPLAG00000018465
UniProt:
A0A3B3UPE2
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MFRFQSLDDDCTLEEEDDGLIEEEDEIDQFNDDTFGAGAIDDDWQEEHKRLAELDERDGL
GAGRGLGGGDSSPGPASAAGRLPLLGFSSGPPGQDADERSGGGDLAESLARFILDADPAI
AGVGAAERPGSAPGPAGPVLSALRGPDQPRVLQQPASIPPKHQLPPGPPASGLPASSVLS
YQQQQHLLRRGAAPMGQMNSHSIWDNSMGFGPVSVTPALVTHMEDSPLMSIIKEVGLPKR
PPQGRSDEGHDLSERAPPPRSSSPVIGSPPVRAVPIGTPPKHPLSLNHQIHHPTAVHVRA
PVQHRFPAPFPERLSPNTLLNLANSPLCRGPFPPRVGPVLSQLQRAQLLNSQVAGFPRGG
PGPPLLAGGGFRPFFGGPPPPHGHRMGPPPPHGPPNHTPPIRHNTTHLHPQHRRMLTQRM
QSRGGDRVRTGLDRRSRDPYSNLMSQKEKEWVTKIQMMQLQSTDPYLDDYYYQNYYEKME
KRQEKERDSSSRKEHTTKLITPQVAKVEHTYRPVQFAGSLGKLTVSSVNNPRKMIDAVVT
TRSDDEEKREKQVWNKRRQVLYTVEKMYSLLLEVQDFEKRFVQTPEEDRDALMEQHKSNT
EQLSNSLQDGDWEDRVSDEQCVMIMSVRKGKRLVARLLPFLPAAQAAAVVMVIARNLPAL
AKKDKQDQALCCLVEPVSAVIQSLSSSALTDLLQELQGGEGQLAAALQNKFGVTLLFLIL
SEGERMQSSDPNCQLMDDNRWTELVFSVTRELLGVPSSSLAPPLFTPPNLLSLFSRYVDR
QRLELLQDKLQISASSR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgatttcagtccctggatgacgactgtacgctggaggaagaggacgatgggctg
atcgaggaggaagatgagatcgaccagttcaatgacgacacgtttggagccggcgccatc
gatgacgactggcaggaggagcacaagcggctggcggagctggatgagcgggacgggctg
ggcgccgggcggggcctggggggcggagactcctccccaggccccgcctccgccgcgggt
cggctccctctgctcggcttctcctctgggccgccgggtcaagacgcagacgagcggtcg
ggaggcggcgacctggccgagtctctggcccgcttcattctggacgccgacccggccatc
gccggcgtcggagcggcagagaggcccggttcggctcccgggccggccggcccggttctg
tcggcgctgcggggcccggaccagcccagagtcctgcagcagcccgcctccatccccccc
aaacaccagctgcccccgggacctcccgcctcaggcctgcccgcctcctccgtgctcagc
taccagcagcagcagcacctcctgcgcagaggagccgctccaatgggccagatgaactct
cacagcatctgggacaacagcatgggcttcgggccggtcagcgtcacgccggcactcgtc
acacacatggaggacagtccactgatgtccatcatcaaggaggtggggcttccgaagcgc
ccgcctcaggggaggagcgacgaaggtcacgacctgtcagagagggccccgcccccccgc
tcctcctctcctgtgattggctctcctccggtgagggcggtgcctatcgggacgccgccc
aaacacccgctgagcctgaaccatcagatccaccaccccacggcggtccatgtcagagcc
ccggtccagcaccggttccccgctccgttccctgagcgcctgtcccccaacacgctgctc
aacttagccaactctccgttgtgccgcggtccgttccctcccagagtcggcccggttctg
tctcagctgcaacgggctcagctgctcaactcccaggtggcgggttttcctcgcggcggc
cccggccctcccctgctggccggcggcgggttcaggcccttcttcgggggcccccctcct
cctcacggccacaggatgggccccccgccgccccacggcccccccaaccacacgccgccc
atcaggcacaacacgacgcacctccaccctcagcaccgccgcatgctgacgcagcgcatg
cagagccgcggcggcgaccgggtcagaaccgggctggaccgccgcagccgggacccgtac
agcaacctgatgagccagaaggagaaggagtgggtgaccaagatccagatgatgcagctg
cagagcaccgacccgtacctggacgactactactaccagaactactatgagaagatggag
aagcgtcaggagaaggagcgagacagcagcagcaggaaggagcacaccaccaagctcatc
acgccgcaggtggccaaggtggagcacacctaccggccagttcagtttgcaggatctctg
gggaagctgacggtgtccagcgtcaacaacccgaggaagatgatcgacgccgtggtaacg
acccgctccgacgacgaggagaagagggagaagcaggtgtggaacaagaggcgccaggtg
ctgtacaccgtggagaagatgtacagtttgctgctggaggtccaggactttgagaaacgc
ttcgtccaaacgccagaggaggacagagacgccctgatggagcaacacaagagcaacacg
gagcaactgagcaactcgctgcaggacggggactgggaggacagggtgagcgatgagcag
tgtgtgatgatcatgtcggtgaggaaagggaagcggctcgtcgccaggctcctccccttc
ctgcctgcggcgcaggctgctgccgttgtcatggtgatcgcacgcaacctccccgcctta
gcaaagaaggacaagcaggaccaggcgttgtgctgcctggtggagccggtctctgcagtc
atccagtctctgtccagctccgccctcactgacctgctgcaggagctgcagggcggcgag
ggtcagctggccgccgcgctgcagaacaagttcggcgtgacgctgctgtttctgatcctg
agtgaaggcgagcgcatgcagagctccgacccaaactgtcagctcatggacgacaatcga
tggacagagttggtgttctctgtgaccagggagctgctcggcgtcccgtcttcatcgttg
gctccgcccctcttcacgcctcccaacctgctgtctctgttctcacgctacgtggatcga
cagaggctggagctgctgcaggacaagctacagatttctgcttcatccaggtag
DBGET
integrated database retrieval system
