Poecilia latipinna (sailfin molly): 106942640
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Entry
106942640 CDS
T08005
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106942640 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106942640 (rabgef1)
Membrane trafficking [BR:
plai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106942640 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
106942640 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
NuA4
FANCI_S1
CID_GANP
Motif
Other DBs
NCBI-GeneID:
106942640
NCBI-ProteinID:
XP_014881453
Ensembl:
ENSPLAG00000015058
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MNKLTKTDIRRIYVYSPSDKSQVVHNATMSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQ
GLCSKCWREEYQRVRQKQIQDDWALAEKLQREEEEAYASSHVAHGPAAAGHASLAPFSKF
EEKKTNEKTRKVTTVKKFFSPSSRTAAKKEPPEGKSASPSISRRASFDADQVSKDFVEFL
KNLHKPGREIHKQCRAFLVSMSSKKDLGADELSECVQDFYQSLADRLMSHFKGSSESVDQ
VMDQVEKYIMTRLYKSVFCPETTDDEKKDLATQDRIRALHWVTVQMLCVSMEEETAEVSE
NVVRAITDIIEMDSKRVPRDKLACITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKA
NPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSPDEFERHMS
GHASPRCSGSEDGRPDGGPGVGGAAGPVLARSSHNLQLLSGLSARQEAVTAAALSLQADL
LTWTDGVRRDVRHILDRYPLDTKASKASAIDANSVDGENLPAPIKPHMFVG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattaacgaagacagatatacgaaggatatacgtttattcaccaagcgacaaa
tcacaggttgtccataacgccaccatgagtcagcggacggagcggcggggcatccacgtc
gaccagtcggacctgctgtgcaaaaaaggatgcggttactatggcaacgccgcatggcag
ggcctgtgctccaagtgctggcgggaggagtaccagcgggtccggcagaagcagatccag
gacgactgggccttggcggaaaagttgcagagagaggaggaggaggcgtatgccagcagc
cacgtggcgcacggcccggccgccgcgggccacgcctcgctcgccccattctcaaagttt
gaggagaagaaaaccaacgagaaaactcgcaaagtgacaacggtgaagaagttcttcagc
ccttcgtctcgaaccgccgctaagaaagagcctccggagggaaagtcggcgtctccgtcc
atcagccgccgcgccagcttcgacgccgaccaggtgtccaaagacttcgtggagttcttg
aagaaccttcacaaacccggcagagagatccacaagcagtgccgggccttcctggtcagc
atgtccagcaagaaggacctgggagcagatgagctgtcggagtgcgttcaggatttctac
cagagcttggccgatcgcctcatgagccactttaaagggtcgtcagagtcggtggatcag
gtgatggaccaggtggagaaatacatcatgacccgcctgtacaagagcgtcttctgccca
gaaactacggacgacgagaagaaggacctggcaacccaagaccggatcagggcgctgcat
tgggtcaccgtccagatgctgtgtgtgtccatggaggaagaaacggccgaagtgtcagag
aacgtggtcagagccataacagacatcatcgagatggactcgaagcgcgttccgcgggac
aagctggcctgcatcactcgctgcagcaagcacatcttcagcgccatcaggatcaccaag
aacgagccggcgtccgccgacgacttcctaccggcgctcatctacatcgtgctgaaggcc
aacccgccgcggctgcagtccaacatccagtacatcacccgcttctgcaacccgagccgg
ctgatgaccggagaggacggatactacttcaccaacctgtgctgcgccgtggccttcatc
gagaagctggacgctcagtctctcaacctttccccagacgagtttgagcgccacatgtcg
ggtcatgcctcgccccgatgcagcggctcggaggacggacggcccgacggcggtcccgga
gtcggcggtgccgccggcccggtcctggcccggtccagccacaacctgcagctgctgtcg
ggtctgagcgcccggcaggaggccgtgacggcggcggcgctcagcctgcaggccgacctc
ctgacctggaccgacggcgtccggcgggacgttcgccacatcctggacaggtatcctctg
gacaccaaggcctccaaggcttccgccatcgacgccaacagcgtggacggcgagaacctg
ccagcacccatcaagccccacatgttcgtcggctag
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