Poecilia latipinna (sailfin molly): 106943296
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Entry
106943296 CDS
T08005
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plai04121
]
106943296
Enzymes [BR:
plai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106943296
Ubiquitin system [BR:
plai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106943296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
106943296
NCBI-ProteinID:
XP_014882095
Ensembl:
ENSPLAG00000019065
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
SNQEVDLYRANIQDKLGLTICYRTDDEDEAGIYISEIDPNSIAAKDGRIREGDKIIQING
VEIQNREDAVALLTTEGNQNISLLVARPEIQLDVGWMDDDRNDFLDDLHMDMLEQQHHQA
MQFTASVLEQKKHEEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENLGDDQTT
TASNTLGSCRKLTYSQDTLGSTDLPFSGESLISADYADADFLGIPADECERFRKLLERKC
QMRSGGAQGLFSLAAGGTEGQTEEGIDKELELLNEELRSIELECLNIVRAHKMQQLREQC
RESWMLHNSGFHNYNTSIDARRHELPDITELPEKSDKDSSSAYNTGESCRSTPLTLELSP
NNSLHRAAENQGAVGLSGSGVSNGKIHKPLLSPVQEAGGPRRCRVSSKDLDGELQAESKE
RKLGEASKGGRGFQPHSPYQHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDG
VSPCDHEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALRIHEERSGMTTDDDAISELKM
GRYWSKEERKQHAMRAKEQKQRREFMKQSRVDCLKDQSAPEDKKEPNIIELSHKKMMKKR
NKKIFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
tctaaccaggaggtggatctgtaccgagcaaacatccaagataaactgggcctgaccatc
tgttacaggactgatgacgaggatgaggctgggatctacattagcgagatcgatccaaac
agcatcgctgcaaaggatggtagaattagagaaggggacaaaatcatacagatcaatggt
gttgagatccaaaaccgagaggatgcggtggcgttgttgaccactgagggcaaccagaac
atctctctgttggtggcccgaccagagatccagctggacgtgggctggatggatgatgat
aggaatgacttcctggatgacctccacatggacatgctggagcagcaacaccatcaggcc
atgcagttcactgccagcgtgctggagcagaagaagcatgaggaggacgggggcaccaca
gacacagctacattgctctccaaccaccacgaaaaggacagcggtgttggtcgcacagac
gagagcacccggaacgatgagagctctgagcaagagaacctcggtgacgatcagacgacc
acagcttccaacacgctgggcagctgcaggaagctgacctatagccaggacaccctcggc
agcactgacctgcccttcagtggtgagtcgctcatctctgcagactacgccgatgctgac
ttcctgggcatcccagccgacgagtgtgagcgcttccgaaagctcctggagcgaaagtgt
cagatgaggagcggcggtgctcagggcctgttcagcctggctgctgggggcactgagggt
cagacagaggagggcatagataaggagctggagttgctcaatgaggagctgcgcagcatc
gagctggagtgcctgaacatcgtccgtgcccacaagatgcagcagctgagggagcagtgc
cgagaatcatggatgctccacaacagtggcttccacaactacaacaccagcatagacgct
cgccgccacgaactgccggacatcacagagctgcctgagaaatcagacaaggatagctcg
agtgcctacaacaccggcgagagctgccgcagcactcctctcactctagaactgtctccg
aataactccctccatcgtgcagcagagaatcagggcgcagttggactgtctggatctgga
gtctcaaatggcaagatacacaagcccctcttgtcccctgtgcaggaagccggtggcccc
aggcggtgcagagtctcctctaaagacctagacggagagctacaagccgagagcaaagag
aggaagcttggggaggcgagtaagggtggacgaggctttcaaccacattccccttaccag
cacgctcacatcccggcccacgctcagcactaccaaagctacatgcagctgatccaacag
aaatctgcagtggaatatgcccagagtcagatgagtctggtcagcatgtgccgcgatgga
gtcagcccctgtgaccatgagcccaggatggagtggaaagtaaagatccgcagcgacggc
acgcggtacatcacgaagcggccagtccgggacaggttgctgagggagcgtgccctccgt
atccatgaagagcgcagcggcatgaccacagacgacgacgccatcagcgaactaaagatg
ggccgctactggagcaaggaggagcggaagcagcacgccatgcgggccaaggagcagaag
cagcgccgcgagttcatgaagcagagccgagtggactgtctgaaggaccagagtgctccc
gaggacaagaaggagcctaacatcatcgaactcagccacaaaaagatgatgaaaaagaga
aataagaaaatttttgacaactggatgaccatccaggaactgctgacccacggcaccaag
tcacctgatgggactagggtttataactcacttctgtctgtgactacagtgtga
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