KEGG   Poecilia latipinna (sailfin molly): 106944527
Entry
106944527         CDS       T08005                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106944527 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plai03019]
    106944527 (exosc2)
Messenger RNA biogenesis [BR:plai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106944527 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     106944527 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 106944527
NCBI-ProteinID: XP_014883046
Ensembl: ENSPLAG00000004605
UniProt: A0A3B3V868
LinkDB
Position
Unknown
AA seq 293 aa
MAVDMRLPTVKNSMSLSHSAGDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKLLEHES
NT seq 882 nt   +upstreamnt  +downstreamnt
atggctgtggacatgagattaccgactgttaaaaactcaatgtctctttcacattctgct
ggtgaccgaaaagatctggttgtccctggagatgtgatcacttcagacactgggttcatg
aggggtcacggcacatatgttgacgaagacaagctgacagcatcagtggctggagaggtg
cagagggtggacaaactaatatgtgtcagacctcttaagacgagatttaatggtgaggtt
ggagatgttgtagttggtagaattacagaggttcaacagaagcgttggaaggtggagacc
aactccagactagattctgtcctcttgttgtcatctgtcaatctgccgggaggagaactg
aggagacgatcagcagaagatgagctcaccatgagagaataccttcaagagggcgatctc
atcagtgcagaagtgcagtctgttttctcagacggagccctgtcacttcacactcgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtgcagctttccccgtctctgataaag
aggcagaaaacgcatttccacaacctaccttgtggagcctccatcatcttggggaataac
ggctttgtatggctgtatcccacgccgggacagcaagaagaggaagctggaggcttctac
accagtctggagcctgtgagcctgtcggatcgagaggtgatttcacggcttagaaactgc
ctactggctctggctgctcataaagtgcttttgtatgacacaagtgttctctattgctac
gagtcgtctctccagcaccaggtcaaggacatcttaaagccagaagtgatggaggagatt
gtaatgttgacacaacagaagctgttggaacacgagagttaa

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