Poecilia latipinna (sailfin molly): 106945087
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Entry
106945087 CDS
T08005
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04140
Autophagy - animal
plai04148
Efferocytosis
plai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106945087 (vps41)
04148 Efferocytosis
106945087 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106945087 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106945087 (vps41)
Membrane trafficking [BR:
plai04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106945087 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
zf_RING_Vps8_fungal
Vps39_1
zf_RING_Vps8
Beta-prop_HPS5
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
TPR_PEP5_VPS11
WD40_Prp19
TPR_7
zf-RING_5
RH_dom
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
106945087
NCBI-ProteinID:
XP_014884004
Ensembl:
ENSPLAG00000012077
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MAEVEEQERQQSGEFTDESEEEDSEEEPKLKYERLSNGVSEILQSDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNATQKYDVSSVKINQISLDESGENVGICSEDGKVQVFGLYTREGFH
ESFDCPVKVVALHPQFSRSNYKQFVTGGNKLLLYEKNWLNRWKTQVLHEGEGTITNVKWR
ANLIAWANNLGVKIYDFSTKQRITNVLRDNVSLRPDMYPCSLCWKDDTTLIIGWGTSIKI
CVVKERKPTEMRDLPSRYVEIVDLSKVSAFETEFFICGLAPLADQLVTLFFVQDPTNQMD
EEDRARPRLDIIQALPESCEEISSDALSVRFYQDNECRDYRLEHSEGESLFYIISPKDIV
VAKERDQDDHIDWLLAKKKYEEALMAAEISFKNIKRHDVQRIGMAYINHLVENRDFNAAA
RKCQKVLGKNMELWENEVYRFKNIGQLKAISQYLPRGDLRLRPAIYEMILHDFLKTDYEG
FATLIREWPGELYNNMAIVQAVNDHLKKDPTNNTLLTTLAELYTYDQRYDRALEIYLRLR
HKDVYQLIHRHNLFSSIEDKIVLLMEFDKEKAVDMLLDNEDKISIDKVVVELDGRPELLH
VYLHKLFKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEE
TVFLLSRMGNCRRALQMIMEEQEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLN
NIGTHVDPILLIKRIKEGMEIPNLRDSLVKILHDYNLQILLREGCKKILVADSLSLLKKM
HRTQMRGVRVDEGNICESCHSTILPSDMAQPFSVVVFHCRHMFHKECLPSSGTIPGLQFC
NICSAKRRGPGSGILEMKK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggagcaggaaaggcagcagagtggggaattcacagatgaatctgag
gaggaggacagcgaggaggagcccaagctgaagtacgagaggctctccaacggggtgtct
gaaatcctccagtccgacgcagccagctgtatgaccgtccacgacaagtttcttgcccta
ggaactcatttcggaaaggttttcctgctggacattcaaggaaatgccactcagaaatat
gacgttagttcagtgaagatcaaccagatcagcctggatgaaagcggggaaaatgtgggc
atctgctctgaggacgggaaggttcaagtgtttggcctctacacgagagagggcttccac
gagagcttcgactgtcctgtcaaagttgttgctttacaccctcagttcagcagatcaaac
tacaagcagtttgtcaccgggggcaacaagttgctcctgtatgaaaaaaactggctgaat
cgctggaagacgcaggtcctgcatgaaggagagggaacgatcaccaacgtgaagtggaga
gccaacctgatagcctgggccaacaacttgggagtaaaaatctatgactttagcaccaag
cagcggatcaccaacgtgctgcgggacaacgtgagtctgcggcccgacatgtacccctgc
agcctgtgctggaaagacgacactacgctcatcatcggatggggaacctccatcaagatt
tgtgtggtgaaagagcgaaaacctactgaaatgagggatctgcccagtcgctatgtggag
atagttgatctttctaaagtgtctgcatttgagacggagttcttcatctgtggtttggcg
ccgctggcggatcagctcgtcaccctgttttttgtgcaggaccccacgaaccagatggat
gaagaggatcgtgcacggcctcgtctcgacatcatccaggctctccccgaaagctgcgag
gagatctcctcagatgctctgagtgttcgcttctaccaggacaacgagtgcagggattac
cgcctggagcattcagagggagagtcgctcttctacatcatcagtcccaaagacatcgtt
gtggctaaagagcgagaccaggacgaccacatcgattggctgctggcgaagaagaaatat
gaggaggcgctgatggctgcggagatcagcttcaaaaacatcaagaggcacgacgttcag
agaatagggatggcttacatcaatcacttggtggagaacagagactttaacgctgctgcc
agaaaatgccagaaggttcttgggaaaaacatggagttgtgggagaatgaggtgtacagg
tttaagaacattggacagctgaaggccatcagtcagtatctaccgagaggagatctgcgt
ctcagaccagccatttatgaaatgatcttgcacgactttctaaaaacggactatgagggt
tttgccacactgatccgggaatggcccggagaactgtacaacaacatggccatagttcag
gctgtcaatgatcacctaaagaaggatcccaccaacaacacgctgctcaccacgctggcc
gaactgtacacttacgaccagcgctacgacagagccttggaaatctacctgaggctgagg
cacaaggacgtctatcagctgatccacagacacaacctgttctcctccatcgaggacaag
attgtcctcctgatggagtttgacaaagagaaagctgttgatatgcttctcgacaacgaa
gacaagatatctatagacaaggtggtggtggagctagatggaaggcctgagctgctgcat
gtgtacctccataaactgttcaagcgggatcaccacaaaggccagaagtaccacgagagg
cagatcggtctgtatgcagagtacgaccgaccaaacctcctaccttttctgagggatagc
acccactgccctcttgaaaaggctcttgagatttgtcagcagaggaactttgtagaggag
actgtcttcctgctcagcaggatggggaactgtagacgagccctccagatgatcatggag
gagcaggaggacgtggacaaagctatagagtttgctaaggagcaggacgacgcagagctg
tgggaggatctcatctcttactctatcgacaagccacctttcatcactggccttctcaat
aacatcggcactcacgtggatcccattctgctcatcaaacgcataaaggaggggatggag
atcccaaacctgagagactcgctggtgaaaattctccatgactacaacctccagattctt
cttcgggaaggatgcaaaaagattcttgtggccgattcgctctccttgctcaagaagatg
catcggacgcagatgagaggagtcagggtcgatgaagggaacatctgtgagtcatgtcac
agcaccatattaccctcagatatggcccagccgttcagtgtggtggtgtttcactgcaga
cacatgtttcacaaggagtgcttaccatcttcaggaactattcctgggctgcagttttgt
aacatctgcagtgcaaagaggcgaggacctggaagtgggatacttgagatgaaaaagtaa
DBGET
integrated database retrieval system
