Poecilia latipinna (sailfin molly): 106945152
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Entry
106945152 CDS
T08005
Symbol
exosc10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106945152 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106945152 (exosc10)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106945152 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
106945152
NCBI-ProteinID:
XP_014884099
Ensembl:
ENSPLAG00000010253
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MMKTSKKKESTNSGSRDDNPDANRAEESELCPGFQDVDAFVKYGLGAVLSATKASAGLPQ
AGDEYDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSHIRDRNKLTGLEERFDLVVD
SNDVILERAGILLDEADGVNRTQNPVMPAGFQPPKIVVSSWNRKGSSSGSRSETFRLLHA
KNVARPQLKFKEKVDNSNTPFVPKIFIKPNALKPLPSYFSNKQIRKERPEDLDVPAALAD
FIHQQRTQEHVEDMFAHPYQYELDHLTIPEKLLSKPEPQMYKPMAETKLSFIDSLEELVA
LNGKLCQLPEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRGEMHILNEAFTDP
TIVKVFHGADSDIEWLQRDFGLYVVNLFDNHQASRALNLARHSLDHLLKNFCNVNSDKRY
QLADWRIRPLPEEMIEYARADTHYLLYIYDCMRAQLLESNHGQPGLLQCVWNKSKDVSLK
KYVKPIFTEESYLELQRKQKRSFNTQQLTTFRLLYAWRDKLARQEDESTGYVLPTHMMIK
ISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQGREMPLLKAEMAAQKKKGLTTIKK
AEVPLFGPHDTSRGSESGHPQLVADEVLVKQGVLFSEEDYKMDVDEQKISSLLAPAKITL
FQELETPAGQRSLSVAQTKARSIIESFENPFRMYLPSSGAHVNKNAKFDPSSKIFEISKR
WKLQSAEQQQKEMEVKKKSKEEAKQKARKLSEERTKAKQSYQESLRNIASVRQQATNSKD
GGRKKARSGCEDGETTPKPSKKLMKSAEKSQKTEPPSEETFKPFDYAQSDLKVFDGSKAK
DNTQFDPNRQAQDFRKKQKFPQGQKNNLSSGNRSMSYMKGKSERGFRHNWPKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacctccaagaagaaggaatccaccaacagtggctcccgggatgataatcca
gacgccaacagagcagaggaaagtgagctttgtcctggctttcaagacgtagacgccttc
gttaaatatggtttgggggctgtgttatcagccactaaagcctcagctggcttgcctcaa
gcaggagatgaatatgatttctaccggagctttccaggcttccaggagttctgtgagagt
caaggagacaagcttctgcactgcatgagtcagataatgcagcatcatggctgcaggtct
cacataagagacaggaacaagctcaccgggctggaggagaggtttgacttggttgtggac
tcaaacgatgttattcttgaaagagcggggattctcctcgacgaagccgacggggtaaac
aggacccagaatcccgttatgcctgccgggtttcagcctccaaaaattgttgtgtccagc
tggaatcgcaagggttccagctctggcagccgatcggagacgttccgactccttcacgcc
aagaacgttgcgaggccccaactgaaatttaaggagaaagttgacaacagcaacacgcct
ttcgtccccaagatcttcatcaagccgaatgcgctgaagccacttccgtcatatttctca
aacaagcaaatacgcaaagagaggccagaggacctcgacgtcccggctgccctggccgac
tttatccaccagcagagaactcaggaacacgtagaagacatgtttgcacatccataccag
tatgaactggaccatctcaccataccagaaaagttgctgtccaagccggagcctcagatg
tacaagccgatggccgagacgaagctttcctttatcgactcactggaggagctggtcgct
ctgaatgggaagctgtgccaattgcctgaatttgctgtggatctcgagcaccattcctac
cggagcttccttggcatcacctgcctgatgcagatctccaccagagaggaggacttcatc
atcgacactctggagctccgcggcgaaatgcacatcctgaacgaggcgttcactgacccg
actatcgtaaaagtttttcacggtgctgattctgacatcgagtggcttcagagggacttt
ggcttgtacgttgtcaacctttttgacaaccatcaggcgagtcgagccctgaacctggcc
agacattctctggaccatttactgaaaaacttctgcaacgtgaactcggacaaacgctac
cagctggctgactggaggattcgccccttgccagaagagatgatcgaatatgctcgagcc
gacacgcactatctcctctacatctacgactgcatgagggcgcagctgctggagtcgaac
cacggccagccgggcctgttgcagtgcgtctggaacaaaagcaaagacgtctcgctgaag
aaatacgtgaagccgatcttcaccgaggagtcgtatttagagctgcagaggaagcagaaa
aggtcttttaacacccagcagctcaccacattcaggctgctgtacgcctggagagacaag
ctggccaggcaggaagatgaaagcaccggatacgtcctccccactcatatgatgatcaaa
atatccgaagagctgcccaaagagccgcagggcatcatcgcctgctgtaaccccgtcccg
ccgctggtgaggcagcaggtcaacgagctccacctgttggtgcagcaaggcagggaaatg
ccgctcctgaaggctgagatggcagctcagaagaagaaaggactcacaaccatcaaaaag
gcagaagtgccgttgtttggtccacatgatacgtccagggggtctgagagcggccaccct
cagctcgttgctgacgaagtcctagtgaaacaaggagtcctgttctcagaggaggattac
aaaatggatgttgatgagcagaaaataagctccttgttagctccagctaaaatcaccttg
tttcaggaactggaaactcctgctggccaaagatccctctccgtagctcagacgaaagcc
aggagtatcatcgagtcttttgaaaatcctttcagaatgtatctgccctccagcggcgcg
cacgtcaacaaaaacgccaagtttgacccgtcttcaaagatattcgagatcagcaagaga
tggaaactgcagagtgctgagcagcagcagaaagagatggaggtcaagaagaaatcaaaa
gaagaagcaaagcaaaaagcaaggaaactgtcagaggaaagaaccaaggctaaacagagc
tatcaggagtctctgcggaacatcgcctccgttcgccagcaagctacaaattcaaaagat
ggtggaaggaagaaagcgaggagtggctgcgaggatggagagacgactcccaaaccgagt
aagaagctgatgaaatcagcagagaaatcccagaagaccgaacctccttctgaagaaacc
ttcaaaccctttgactacgctcagtcagatcttaaagtttttgatggctccaaagccaag
gacaacacgcagtttgatccaaatcgacaagcccaggattttaggaaaaagcagaaattt
cctcaaggacaaaagaacaacttatcgtcaggaaacagaagcatgtcgtacatgaagggc
aaatcagaaagggggttccggcataactggcccaagagatag
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