Poecilia latipinna (sailfin molly): 106945804
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Entry
106945804 CDS
T08005
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106945804 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106945804 (hbs1l)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106945804 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
106945804
NCBI-ProteinID:
XP_014885221
Ensembl:
ENSPLAG00000006193
UniProt:
A0A3B3VAM0
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATANQFIYSRRERQAPKEEPLEEEEY
EDEDVPMSPCVDFNLDPLNQAKLFSCLDHMRAVLGDAVPDSVLTQAAMKHGFDPQRALDA
VLSEDSERAPVTRSAAEDMAPVGRVAQEQTPLPQRTKQEAVAEKAKSRDAAPDKLDSEVV
PKVARMTVSGKKQTMGFDVPSSGENGVLASPARRGDSPENTKATPVPEAAPKRPETPSKT
SNGDEVSAAATPGRSSGKTRQAINIKAELERRQGGKPLLNLVVIGHVDAGKSTLMGHLLY
LLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTL
MDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLA
VAVNKMDQVNWQKERFQEISSKLGHFLKQAGFKESDVFFVPTSGLSGENLTARSTVSELT
SWYSGPSLLEQIDAFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKILA
VPPNETCTVKGITLHDEALDWAVAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFR
ARILLFNIEVPITQGFPVLLHYQTVSEPATIKKLISVLHKSSGEVLKKKPKCLSKGMNAI
VEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcgaggttacaactacgatgaagactttgaagatgacgac
atgtatggacagtctgtggaggatgactactgcatttcaccagcaacagccaatcagttc
atctattcacgccgagagcgtcaagcacctaaagaggagcctctagaggaggaagaatat
gaagatgaggatgttcccatgtccccttgtgttgacttcaaccttgaccctcttaatcaa
gcgaagctgttctcctgtctggaccacatgcgagcagtactgggagatgcagtgccagac
tccgtcctgacccaggctgccatgaaacacggatttgatccacagagggctctggacgca
gtgctgtctgaagacagtgaaagagcaccggttaccagaagtgcagctgaagacatggcg
ccggtgggccgagttgcacaagagcagacgcctcttccacagagaaccaagcaggaggcc
gtcgctgagaaagctaaaagcagagatgcggctcccgataaactggactccgaagtggtt
cccaaagtggccagaatgaccgtctctggcaagaagcagaccatgggcttcgatgttccc
agctcaggggaaaacggcgttctcgccagcccagcacggcgaggtgacagccccgaaaac
accaaggcgactccggtccccgaggccgcacccaaacgacccgagaccccatccaaaacg
tcaaacggagacgaggtctccgccgctgctacgccaggacgctcctccggaaagacgcgg
caggcgatcaacatcaaggcagaactggagaggagacaagggggcaaacctctgttaaat
ttagtagtaataggtcatgtggacgcaggcaagagcaccctgatgggccacttgctttat
ctgctggggaacgtcaacaagcgcaccatgcacaagtacgaacaggagtcgaaaaaggct
ggaaaggcctcctttgcctacgcctgggttctggatgaaaccggcgaggagagggacaga
ggggtgacaatggatgtgggcatgacaaagtttgagacaaactctaaggtggtgactctg
atggacgctccgggacacaaagacttcattcccaacatgatcacaggcgctgcacaggcc
gacgtcgcggtgctcgtggtggacgccagcagaggagagttcgaggcgggctttgaagca
ggcggtcagaccagagagcacgccctgctggtgcgttcgctgggtgtcactcagctggcc
gtagctgtaaacaagatggaccaggtaaactggcaaaaggagcgtttccaagaaatcagc
tcaaaacttggtcattttctgaagcaggcgggattcaaggagtccgatgttttcttcgtc
cccaccagcggcctctcaggagaaaatctcactgcaagaagcacagtatcagagctgaca
tcttggtacagcggacccagcctgctggagcagattgatgcattcaaagcccctcagcgg
tcaatagacaaacctttcagactgtgcgtctcagatgtgttcaaagaccagggctcaggc
ttctgtgttacagggaagattgaggctggttttattcagacaggagacaaaatactggca
gtgcctcccaatgaaacctgcacagttaaaggaatcactcttcatgatgaggcgctggac
tgggccgtagccggagaccacgtcagcctcaccgtgactgggatggacatcatcaagatt
aatgtcggctgtgtgttctgtgaccccaaggagccgattcgagtctgtactcgattcaga
gccagaatcctgctcttcaatatcgaggttcccatcacacaaggctttccggtacttttg
cattaccagacagtcagtgagccggccaccattaagaaactaatcagcgttctgcacaag
agcagcggtgaagtcctaaagaagaagccaaagtgtttgagtaagggcatgaatgccatt
gtggagattcagacccagaggccggtgtcattagagctgtacaaggactacaaagaactg
ggccgcttcatgttgagatacgtcggctccaccatcgctgcaggtgtcgtcacagagatc
aaagaatga
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