Poecilia latipinna (sailfin molly): 106946282
Help
Entry
106946282 CDS
T08005
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106946282 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plai03021
]
106946282 (sf3b3)
03041 Spliceosome [BR:
plai03041
]
106946282 (sf3b3)
03036 Chromosome and associated proteins [BR:
plai03036
]
106946282 (sf3b3)
Transcription machinery [BR:
plai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106946282 (sf3b3)
Spliceosome [BR:
plai03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106946282 (sf3b3)
Complex B
106946282 (sf3b3)
Complex C
U2 SnRNP specific factors
106946282 (sf3b3)
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106946282 (sf3b3)
TFTC complex
106946282 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
106946282
NCBI-ProteinID:
XP_014885986
Ensembl:
ENSPLAG00000014330
UniProt:
A0A3B3UE66
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNQFEKVHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDEIGDKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTETTKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLTAGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDMGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcaccctgcagcgggccaccggcatcactcatgccattcatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcctggaatta
ttgcgtccggatgcgaacacgggaaaggtgcataccctcctcacgatggaagtgttcggc
atcgtcaggtccctgatggccttcaggctcacaggaggaactaaagattacatcgttgtg
ggaagcgacagcggccgcatcgtcatcctggagtaccacccgtccaaaaaccagtttgag
aaagttcaccaggaaacgtttgggaagagcggctgccggcgcatcgttcccggacagttc
ctggccgtcgacccaaaaggaagagctgtgatgatcggagcgatagagaagcagaagctg
gtctacatcctgaacagagacgccgctgccaggctcaccatctcgtctcctctggaagct
cacaaagcgaacacgctcgtttatcacgtggtcggagtcgacgttggctttgagaatccc
atgtttgcctgtttagaaatggactacgaggaagccgacaacgacccgacaggagaagct
gctgcaaacacacagcagactctgaccttttatgagctggatctgggtctgaaccacgtg
gtccggaagtacagcgaggctttggaggagcatggaaacttcctcatcaccgttcccggc
ggttcggacggacccagcggcgttttgatctgctctgaaaactacatcacctacaagaac
tttggggatcagcccgacatccgctgtcccatcccccgccgcaggaacgacctggatgac
cctgagcgcggcatgatctttgtctgctcagccacccacaaaaccaagtccatgttcttc
ttcctggctcagaccgagcagggagacatcttcaaggtcaccctggagaccgacgaagaa
atggtcactgaaatccggcttaaatacttcgacacgatccccgtggcaacagccatgtgc
gtcctgaagaccggcttcctgtttgtggcctcagagtttggaaaccattatctttaccaa
atcgctcatttgggcgacgacgacgaggagccggagttctcctcggcgatgccgctggag
gagggagacaccttcttctttcagcctcggccgctcaaaaacttggtgctggtggatgag
caggagaacctttcccccatcatgtcctgtcagattgctgatttggccaatgaagacaca
cctcagctgtatgtgtcctgtggacggggaccaaggtccactctgagggttcttcgccac
ggactggaggtttcagagatggctgtgtctgagctgcctggtaaccccaacgccgtgtgg
accgtacgccgacacgtggaagatgagttcgacgcttacatcatcgtgtctttcgtcaac
gccacgctggttctgtccatcggagaaaccgtggaggaagtgacagactccgggtttctg
ggaacgacgcccactctgtcctgctccctgctgggcgaagacgccctcgtgcaggtttac
ccggacggcattcgtcacatccgagcggacaagcgtgtgaacgagtggaaaactcccggg
aaaaaaaccattgtccgctgcgccgtgaaccagcggcaggtcgtcatcgctctgaccgga
ggagaactcgtctacttcgagatggatccgtcgggccagctgaacgaatacacggagcgg
aaggagatgtctgcagacgtggtctgcatgagcctggccaacgtcccgcctggcgagcag
cgctcccgcttcctggctgtgggcctggtggacaacacggtccggatcatctccctggac
ccgtcggactgtctgcagccgctgagcatgcaggcgcttcctgctcagccggaaagcctg
tgcatcgtcgagatgggaggcgtcgagaaacaggatgaaatcggagataaaggaaccatc
ggcttcctctacctcaacatcggcctgcagaacggtgttctgctgaggaccgtgttggac
ccggtaaccggtgacctgtcggataccagaacccggtacctggggtcccgtccggtcaag
ctgttcagagtccggatgcagggacaggaggctgttctggccatgtccagccgctcgtgg
ctcagctactcctatcagtcccgcttccatctgacgccgctctcttatgagacgctggag
tacgcgtccggctttgcctcagagcaatgccctgaaggcatcgtggccatctccaccaac
actctgaggattttggctctggagaaactgggggccgtcttcaaccaggtggcgttccct
ctgcagtacacgccccggaagtttgtaatccacccggaaaccaacaacctcatcctgata
gagaccgaccacaacgcctacaccgagacgaccaaagctcagaggaagcagcagatggct
gaggagatggtggaggcggccggtgaggatgagcgagagctggctgccgagatggcggcg
gcgttcctgaacgagaacctccctgaagccattttcggcgcgcccaaagctggagcgggt
cagtgggcttcactggtgcgactggttaaccccatccagggctccactctggatcaggtg
cagctggagcagaacgaagctgccttcagtgtggccgtgtgccgcttccccaacaccggc
gatgattggtacgtcctggtgggagtcgccagagacatgatcctcaaccccagatctgta
ggcggtggcttcatctacacgtatcgcctcaccgccggaggggagaagctggagtttgtg
cacaagactccggtggaggacgtgccgctcgccatcgcaccgttccagggacgcatcctg
gtcggagtcgggaaactgctgagaatctacgacatgggcaagaagaagctgctgcgcaag
tgtgagaacaagcacgttcccaacctggtgacgggcatctacaccatcggccagcgcgtc
attgtgtccgacgttcaggagagcctgttctgggtccggtaccggcgcaacgagaaccaa
ctgatcatcttcgcagacgatacgtacccccgctgggtgacgacggcctgtctgctcgac
tacgacaccatggcttccgccgacaagtttggcaacatcagcatcgtgcgtcttcctccc
aacaccagtgatgatgtggatgaagaccccacaggaaacaaggctctgtgggatcgaggt
ctcctgaacggagcgtcacagaaggcagaggttgtggtgaactaccacatcggagagacg
gtgctgtcgctgcagaagaccactctgatccccggcgggtcggagtcgctggtgtacacc
acgctttcggggggcatcggcatcctggtgccgttcacgtcacacgaggatcacgacttc
ttccagcacctggagatgcacatgcgctccgagtttcctccgctgtgcggcagagatcac
ctcagcttcaggtcctactactacccagtgaagaacgtgatcgacggcgatctgtgtgag
cagttcaacagcatggatccgcacaagcagaagagcgtggcggaggagctggaccgaaca
ccgcccgaagtctccaagaagctggaggacatccgcacccgttacgctttctaa
DBGET
integrated database retrieval system