KEGG   Poecilia latipinna (sailfin molly): 106946282
Entry
106946282         CDS       T08005                                 
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106946282 (sf3b3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plai03021]
    106946282 (sf3b3)
   03041 Spliceosome [BR:plai03041]
    106946282 (sf3b3)
   03036 Chromosome and associated proteins [BR:plai03036]
    106946282 (sf3b3)
Transcription machinery [BR:plai03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     106946282 (sf3b3)
Spliceosome [BR:plai03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106946282 (sf3b3)
 Complex B
    106946282 (sf3b3)
 Complex C
   U2 SnRNP specific factors
    106946282 (sf3b3)
Chromosome and associated proteins [BR:plai03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     106946282 (sf3b3)
    TFTC complex
     106946282 (sf3b3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Nucleoporin_N
Other DBs
NCBI-GeneID: 106946282
NCBI-ProteinID: XP_014885986
Ensembl: ENSPLAG00000014330
UniProt: A0A3B3UE66
LinkDB
Position
Unknown
AA seq 1217 aa
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNQFEKVHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDEIGDKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTETTKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLTAGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDMGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctctacaacatcaccctgcagcgggccaccggcatcactcatgccattcatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcctggaatta
ttgcgtccggatgcgaacacgggaaaggtgcataccctcctcacgatggaagtgttcggc
atcgtcaggtccctgatggccttcaggctcacaggaggaactaaagattacatcgttgtg
ggaagcgacagcggccgcatcgtcatcctggagtaccacccgtccaaaaaccagtttgag
aaagttcaccaggaaacgtttgggaagagcggctgccggcgcatcgttcccggacagttc
ctggccgtcgacccaaaaggaagagctgtgatgatcggagcgatagagaagcagaagctg
gtctacatcctgaacagagacgccgctgccaggctcaccatctcgtctcctctggaagct
cacaaagcgaacacgctcgtttatcacgtggtcggagtcgacgttggctttgagaatccc
atgtttgcctgtttagaaatggactacgaggaagccgacaacgacccgacaggagaagct
gctgcaaacacacagcagactctgaccttttatgagctggatctgggtctgaaccacgtg
gtccggaagtacagcgaggctttggaggagcatggaaacttcctcatcaccgttcccggc
ggttcggacggacccagcggcgttttgatctgctctgaaaactacatcacctacaagaac
tttggggatcagcccgacatccgctgtcccatcccccgccgcaggaacgacctggatgac
cctgagcgcggcatgatctttgtctgctcagccacccacaaaaccaagtccatgttcttc
ttcctggctcagaccgagcagggagacatcttcaaggtcaccctggagaccgacgaagaa
atggtcactgaaatccggcttaaatacttcgacacgatccccgtggcaacagccatgtgc
gtcctgaagaccggcttcctgtttgtggcctcagagtttggaaaccattatctttaccaa
atcgctcatttgggcgacgacgacgaggagccggagttctcctcggcgatgccgctggag
gagggagacaccttcttctttcagcctcggccgctcaaaaacttggtgctggtggatgag
caggagaacctttcccccatcatgtcctgtcagattgctgatttggccaatgaagacaca
cctcagctgtatgtgtcctgtggacggggaccaaggtccactctgagggttcttcgccac
ggactggaggtttcagagatggctgtgtctgagctgcctggtaaccccaacgccgtgtgg
accgtacgccgacacgtggaagatgagttcgacgcttacatcatcgtgtctttcgtcaac
gccacgctggttctgtccatcggagaaaccgtggaggaagtgacagactccgggtttctg
ggaacgacgcccactctgtcctgctccctgctgggcgaagacgccctcgtgcaggtttac
ccggacggcattcgtcacatccgagcggacaagcgtgtgaacgagtggaaaactcccggg
aaaaaaaccattgtccgctgcgccgtgaaccagcggcaggtcgtcatcgctctgaccgga
ggagaactcgtctacttcgagatggatccgtcgggccagctgaacgaatacacggagcgg
aaggagatgtctgcagacgtggtctgcatgagcctggccaacgtcccgcctggcgagcag
cgctcccgcttcctggctgtgggcctggtggacaacacggtccggatcatctccctggac
ccgtcggactgtctgcagccgctgagcatgcaggcgcttcctgctcagccggaaagcctg
tgcatcgtcgagatgggaggcgtcgagaaacaggatgaaatcggagataaaggaaccatc
ggcttcctctacctcaacatcggcctgcagaacggtgttctgctgaggaccgtgttggac
ccggtaaccggtgacctgtcggataccagaacccggtacctggggtcccgtccggtcaag
ctgttcagagtccggatgcagggacaggaggctgttctggccatgtccagccgctcgtgg
ctcagctactcctatcagtcccgcttccatctgacgccgctctcttatgagacgctggag
tacgcgtccggctttgcctcagagcaatgccctgaaggcatcgtggccatctccaccaac
actctgaggattttggctctggagaaactgggggccgtcttcaaccaggtggcgttccct
ctgcagtacacgccccggaagtttgtaatccacccggaaaccaacaacctcatcctgata
gagaccgaccacaacgcctacaccgagacgaccaaagctcagaggaagcagcagatggct
gaggagatggtggaggcggccggtgaggatgagcgagagctggctgccgagatggcggcg
gcgttcctgaacgagaacctccctgaagccattttcggcgcgcccaaagctggagcgggt
cagtgggcttcactggtgcgactggttaaccccatccagggctccactctggatcaggtg
cagctggagcagaacgaagctgccttcagtgtggccgtgtgccgcttccccaacaccggc
gatgattggtacgtcctggtgggagtcgccagagacatgatcctcaaccccagatctgta
ggcggtggcttcatctacacgtatcgcctcaccgccggaggggagaagctggagtttgtg
cacaagactccggtggaggacgtgccgctcgccatcgcaccgttccagggacgcatcctg
gtcggagtcgggaaactgctgagaatctacgacatgggcaagaagaagctgctgcgcaag
tgtgagaacaagcacgttcccaacctggtgacgggcatctacaccatcggccagcgcgtc
attgtgtccgacgttcaggagagcctgttctgggtccggtaccggcgcaacgagaaccaa
ctgatcatcttcgcagacgatacgtacccccgctgggtgacgacggcctgtctgctcgac
tacgacaccatggcttccgccgacaagtttggcaacatcagcatcgtgcgtcttcctccc
aacaccagtgatgatgtggatgaagaccccacaggaaacaaggctctgtgggatcgaggt
ctcctgaacggagcgtcacagaaggcagaggttgtggtgaactaccacatcggagagacg
gtgctgtcgctgcagaagaccactctgatccccggcgggtcggagtcgctggtgtacacc
acgctttcggggggcatcggcatcctggtgccgttcacgtcacacgaggatcacgacttc
ttccagcacctggagatgcacatgcgctccgagtttcctccgctgtgcggcagagatcac
ctcagcttcaggtcctactactacccagtgaagaacgtgatcgacggcgatctgtgtgag
cagttcaacagcatggatccgcacaagcagaagagcgtggcggaggagctggaccgaaca
ccgcccgaagtctccaagaagctggaggacatccgcacccgttacgctttctaa

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