Poecilia latipinna (sailfin molly): 106946581
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Entry
106946581 CDS
T08005
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106946581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106946581
03009 Ribosome biogenesis [BR:
plai03009
]
106946581
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106946581
Spliceosome [BR:
plai03041
]
Complex A
U2 snRNP components
U2 related factors
106946581
Complex B
106946581
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106946581
Ribosome biogenesis [BR:
plai03009
]
Eukaryotic type
90S particles
Helicases
106946581
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
Flavi_DEAD
nSTAND3
AAA_29
SRP54
AAA_25
nSTAND_NTPase5
AAA_7
Motif
Other DBs
NCBI-GeneID:
106946581
NCBI-ProteinID:
XP_014886489
Ensembl:
ENSPLAG00000002863
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MFFLYMLGFFLGTPASFCCPKTRLLGRPARISGRDRDRDRDRNRDRTGNRGQDAMSGGDP
VASAAASWSFANRPPVQQQTNPFTNLPHTPRYHEILQKRLRLPVWEYRDVFTDILMRNQS
FVLVGETGSGKTTQIPQWCVDMVRSLQGPRRAVACTQPRRVAAMSVAQRVSDEMDVVLGQ
EVGYSIRFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGV
LKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAA
IRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREVDNLGPQVGDMKIIPLYSTLPPQ
QQQRIFEPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES
LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYRTEMQDNTYPEILRSNLGSVVLQLK
KLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDNGDLTELGSMMAEFPLDPQLAKMV
IASCEFNCSNEILSITAMLSVPQCFVRPTEAKKVADDAKMRFAHIDGDHMTLLNVYHAFK
QNHESTQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRNSGDFNSRDYYLNIRQALVT
GFFMQVAHLERTGHYLTAKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKP
EWLVKIAPQYYEMSNFPQCEAKRQLEHIIAKLSSKEYTQY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctgtacatgctcgggttctttctgggtactccagcttccttctgctgtcca
aaaacacgactgttaggtcgccctgcaaggataagtgggcgcgacagagaccgtgatcgt
gacaggaaccgggatcggaccggcaacaggggccaagacgcgatgtcgggcggtgacccc
gtcgcctcggccgcagccagctggagtttcgcgaatcgacctcccgttcagcagcagacg
aaccccttcaccaacctgccccacacgccgcgctaccatgagatcctacagaagcggctg
cggctcccggtctgggagtacagagacgtctttacggacatcctgatgcggaaccagtcg
ttcgtgctggtcggagagacgggctctggaaaaaccacgcagatcccacagtggtgtgta
gacatggtgcgttcgctgcaggggccgaggagagcggtggcctgcacccagcccaggagg
gtggcggcaatgagcgtcgcccagagggtgtctgatgagatggatgtggtgctgggtcaa
gaggtgggctactccatcaggtttgaggactgcagctctgccaaaactgtgttaaagtac
atgacagatggaatgttgctgcgggaggctatgaacgatcccctgctggagcgttatggt
gtcatcattctggacgaggcccacgaacgcacattagccaccgacatcctcatgggggtt
ctcaaggaagtagtgcgccagaggtctgacctcaaggtcatcgtcatgagcgcaacgctg
gacgccgggaagttccaagtgtactttgacaactgcccgctgctaaccatccccggacgc
acgcaccccgtggagatcttctacacaccggagcccgagcgagactacctggaggcggcc
atccgcaccgtgatccagatccacatgtgcgaggaagaagagggcgacgttctgctcttc
ctcactggacaggaggaaatcgacgaagcctgcaagcgaatcaagcgtgaggtcgacaac
ctggggccacaagtcggcgatatgaaaatcatccccctgtactccacgctgccgccacag
cagcagcagaggatctttgagccgcctccgccaaacaagccaagcggcgctattggaaga
aaggtcgtcgtgtcaacaaacatcgccgagacatccctgaccatcgacggagtggtgttt
gtaattgatcccggatttgccaagcaaaaggtgtacaacccacgcatcagagtggaatcc
cttctggtcaccgccatcagcaaggcctcggctcagcagagagcgggtcgcgccggacgg
acgcgcccgggaaaatgtttccgcttgtacacggagaaagcctacaggacagaaatgcag
gacaacacatatccagagatcctgaggtctaatcttggctccgtggtgctgcagctgaag
aaactgggcatcgacgatcttgtgcactttgacttcatggaccctccagccccggagacc
ctgatgcgagcgctggagctgctgaactacctggcagcgctcaacgacaacggcgacctg
accgagctgggctccatgatggcggagttccccctggacccgcagctcgccaagatggtc
atcgccagctgcgaattcaactgctccaacgagatcctctccatcaccgccatgctgtca
gtcccacagtgcttcgttcgacccacggaggccaagaaggtggccgatgatgccaagatg
cgctttgcccacatcgacggagaccacatgacgttactcaacgtttaccatgcctttaag
cagaaccacgagtccacccagtggtgctacgataactttgtgaactaccgctcgctgatg
tcggcggacaacgtccggcagcagctgtcgaggatcatggatcgcttcagcctgccaaga
aacagcggcgatttcaacagcagagactattatctcaacatccgacaagcgctggtcacc
ggcttcttcatgcaggttgctcaccttgagcgcaccggccattacctgacggcaaaggac
aaccaggtggtgcagctgcacccctccactgtgctggaccacaaacctgagtgggtgctc
tacaacgagttcgtcctcaccaccaagaactacatccgcacctgcacagacatcaagccc
gagtggctggtgaaaattgccccgcagtactacgagatgagtaacttccctcagtgtgaa
gcaaaaagacagttggagcatattattgcaaaactctcatccaaggaatacactcagtac
taa
DBGET
integrated database retrieval system
