Poecilia latipinna (sailfin molly): 106947621
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Entry
106947621 CDS
T08005
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plai01001
]
106947621 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plai04054
]
106947621 (ciita)
Enzymes [BR:
plai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106947621 (ciita)
Protein kinases [BR:
plai01001
]
Serine/threonine kinases: Other
TAF1 family
106947621 (ciita)
Pattern recognition receptors [BR:
plai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106947621 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
RsgA_GTPase
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
106947621
NCBI-ProteinID:
XP_014888237
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MAQFAEVLNQVRSVLTVALPGEVHALLEGLVEEGIISEAYRNSLNLHWLNDGIVPKFTSK
PGCVELDEDLNTPGSVAQLDLNQEPMSRVRTSGSKSLAGDHNVEQTESVSLIEEPNSTRF
TLEKNKWLQHEILQQNQEEMQDLLEEVLMDMSYFNQDPLSYDCTLRSIDEKAELLSGARS
EPPSDNESINMGNEESEEVWLQQLEESARRIAVPLWQNWDRGRGMLQTLLPCGPSSCSIS
DRMMLEGEAQSVVLDKEEEMELAAACSSLDTCVGDFECEELSFACDTDAGRSEREGLHFS
TLSGVAVFNADDFRILGATRNASPVEACEATEAGYITQILEGKFDVLCPVGKTADKVDDL
FCSTPDAPYQQCGTQSGLSEATFRDLLHSDVPEDSRTDLQDASHYSLAEGFTDYLEDAEM
YNQDGEFQEKTDLHCDAKMQENDQDSSGLLDLGHIADHCWDDEYLLSQIFSFSNLLFSQD
LGPDCLDEITRNSDTPVALEASDTANHNEQREQWKPSDKIKPKRKRQRDALSTQCTNGDS
RVKRQKATEPPKTQEETAEPPAIHDAEAVSVPAESVGCLPTTPPGNLLMFPPQSANSIPI
QFITIPDPSAYKVVQLSSSPPPLIRLPLPNTAATPTYIFVPNPSPTRKRQVPPLSPADGA
VAPFLMSSIQPGSMSDTASKVTTPPAAPLSPTNEVSPCKESPKSPVVVEIPQAVKDYIQQ
SKIHMSQVCQDMEAGLRMNAHYVNVSVSQREIARAGKNTNRCLDKELIITGDIDRQKNSM
GQSQIFDSLNGKRYNVLFGNAGMGKTTVIKKLCLDWSIDCIPQFDFVFLLDGKQLALTEP
VHSLQTLLLSQSSFAPRCADPDGVYAQILAAPKRVLIVFDGFDELRHYEVLLQTQKKELV
ASLQKDSKAQAFTVKQLFSSILQRVLLPGCTLLLATRPRGTASQLLRRADSFLEVCGFTP
ANVETYVSQYFSDPGLRESALDFLKSSSYLNLLCWNPALCHLVCAALEQCKSEAALPRTL
TALCHKVLCLKMEKDRGSTESLPEANKMNTVEPMENTDISSNSQGRRVQKNNRTRPRAVA
CAASGNQRARRTKGQKKLVEENVCEDTIRSELLSQLCSIAWEGVKSNSSVVPKGRTVSTQ
LRAFSLRTGLLLSQSLMRRTPSKGEETEGGGQVNKGIEKVEKEENREKGGNPQTSDECED
GILLWANPFLQSYMAAVHLSLSRTVTDHSFLQTLPFQMGAKGRRKPQREEMELTQRIAAG
LLFHNRTELQSLHSYSETVFRDMVASKQALVMKHLEGLCFGDLSSAQILEACNYVYEASF
THQESGTDTSAKMLTHLASNLPELLTFRGVPLNPPDVFTVQNARRAGGAEGRSFCLDLED
SGIQICGLRTLVALSNINTYRACIADVVTLWEELEKRSDEGLLQGAVSKFKIHPLKATQV
CHIEHLERLVSIHTSKRLSDSSDQSNSLLAEGVPAVKELYKLEFELDPENSPLALPKLWD
LLPGLHNLQHLDVENSKIGDKGAEKLANALVSLHSLEVLNLSENCIGDQGVKKLALALKD
LPKLHCLSLYSNVISDEGAESLAAVLPHMASLTDLDIKYNKMTDIGAQSLGASLRKCSKV
KTLRMWNQCIPYGVFERLKQQDSRILWQ
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttcgccgaggtcctgaaccaggtgaggtcggtcctcaccgtggcgctgccc
ggtgaggttcacgctctgctggagggtctggtggaagaggggatcatctcggaggcatac
aggaacagtttgaatctgcactggctcaatgatggcattgtgcctaaattcacgagcaaa
ccaggatgcgtcgagctggatgaggacttaaacactccaggatccgtggctcagttggac
ctcaaccaagaaccgatgagccgagtcagaacaagcggatcgaaatctctcgctggtgac
cacaatgtggaacaaacagaatcggtctcattaatagaggaaccaaacagcacaagattt
accctggagaagaacaagtggctccaacatgaaattctgcagcaaaatcaggaggaaatg
caggatttattggaagaagttctaatggacatgtcctacttcaaccaagaccctctttcc
tatgactgcactctcagatccattgatgaaaaagcagaactgctgagcggtgcaaggagt
gagcctcctagtgataatgaaagcataaacatggggaatgaggaaagtgaggaggtgtgg
ttacagcagctagaggaatcggccaggaggatagctgttcctctgtggcagaactgggac
agagggagagggatgttgcagaccctgctgccctgtgggccaagcagctgctcaataagc
gacaggatgatgctggagggtgaagcccagagtgtcgttttggacaaggaggaggaaatg
gagcttgcagccgcttgcagttcacttgacacctgcgttggcgactttgagtgtgaagag
ctgagctttgcgtgtgacacagacgcaggcaggtcagaacgagaagggcttcacttttct
accctcagcggggttgctgtgttcaatgcggacgacttcaggatccttggagcgacaaga
aacgcctcacctgttgaagcctgcgaagcaacggaggcgggatacatcacccaaatactg
gagggcaaattcgacgttctgtgtccagttggcaagactgcagacaaagtggatgacctg
ttctgttccacaccagatgcaccatatcaacaatgtggaacacagtcaggactgtctgaa
gccactttcagggacctgctacattcagatgtgcctgaagacagcagaactgatctgcaa
gatgcctctcattatagtctcgcagaaggatttacagattacctagaagatgcagaaatg
tataaccaagatggagaattccaagaaaagacggatttacattgtgatgccaagatgcaa
gaaaacgaccaggattcctcgggcctgttggatttgggtcatatagcagaccattgctgg
gatgatgaatatttactttctcaaatcttcagtttctcaaatctgctcttcagtcaagat
ctggggcctgactgccttgatgaaatcacccgaaacagtgacactcctgtggcactggag
gcctctgataccgctaaccacaacgagcagagagagcagtggaagccatcggacaaaata
aagcctaagagaaaaagacagagagatgccctgtccacgcagtgcaccaatggagactcc
agagtgaaaaggcaaaaagcaacagaaccaccaaaaacccaggaagaaactgctgagcca
cctgccattcatgatgccgaagcagtgtcagttccagcagagtctgtgggatgccttccc
accactcctccgggcaacctgctcatgttcccgcctcagtcagctaattccattcccatt
cagttcatcacaatcccagacccatctgcttataaggtggtccagctatcctcctccccg
cctccgcttattaggctcccgctcccgaacacggctgctacgccaacgtacatcttcgtt
cctaatccctccccgacccgcaaacgccaggttccacccctctctccagcggacggtgca
gtggcgcccttcctgatgagttcaatccagccaggttccatgtcggacacagccagcaaa
gtcacgaccccccctgcagctcctctgtcccccacaaacgaggtatccccatgtaaggag
tcgccaaagtcccctgtggttgtggaaatcccccaggctgtgaaggactacatccagcag
tcaaaaatacacatgagtcaggtctgccaggatatggaggcaggcctgaggatgaacgcc
cattacgtgaacgtgagtgtgagccagagagagatcgctcgcgctgggaaaaacacgaac
agatgtctggacaaggagctcatcataactggagacatcgaccgccagaagaactccatg
ggacagagtcagatctttgacagcctgaatgggaaacgctacaacgtgctgtttggcaat
gctggcatggggaaaacaaccgtgatcaagaagctgtgtctcgactggtccatagactgc
atcccccagtttgactttgtctttctattagacggcaaacagctcgctttaacggagccc
gtccacagcctccagacgctgctgctcagtcagtcctccttcgctccacgctgcgcggac
cctgatggggtttacgctcagatcctcgcagctcctaaacgggtgcttatcgttttcgat
gggtttgacgagctgcggcactacgaagtcctgctccaaactcagaagaaggagttggta
gcctcgctgcaaaaagacagcaaagcccaggccttcacggtgaagcagctgttctccagc
atccttcagagggtcctgcttccaggctgcacgctcctcctcgccacccgcccgagaggc
acggccagccagttgctccggcgcgcggacagctttctggaggtctgcggcttcactcca
gcgaacgtggagacgtacgtctcccaatatttttccgatcctggacttagggaatctgct
ttggacttcttaaaaagcagcagctacctgaacctcctctgctggaacccggctctctgc
cacttggtgtgcgcagctttggaacagtgcaaaagcgaggctgccttaccaagaacatta
actgcactctgtcacaaggtgctctgcttgaaaatggaaaaagacagaggaagcacagag
tcacttcctgaggccaataaaatgaacacagttgaacccatggaaaatacagacatttct
agcaattctcaggggaggagagtacagaaaaataatcgcacaaggcccagagcggtagcg
tgcgctgcttctggtaaccaaagagcaaggaggacgaagggacagaagaaactggttgag
gagaacgtgtgcgaggacaccatcagatcagagctgctgtcccagctttgctctatagcc
tgggagggggtgaaatccaactcatctgttgttcccaaaggacgaactgtctccacccaa
ctcagagccttcagcttgaggacgggcctgctgctttctcagtccctcatgagaaggacg
ccctccaaaggagaggagacggagggaggaggacaagttaacaaagggatagaaaaagta
gagaaggaagagaacagagaaaagggaggaaacccacaaacgtctgatgaatgtgaagat
gggatcctgttgtgggctaatcctttccttcagagttacatggctgctgtccatttgtct
ttgtcaaggactgtgacagaccactcctttctccagaccttgcctttccagatgggagcc
aaaggccgacggaaaccacagagggaggagatggagctgacgcagcggatcgccgcaggc
ctcctgttccacaacaggacagagctacagagtcttcattcatactcggaaacggtcttc
agggacatggttgccagtaagcaggctttggtgatgaaacacctggaaggtctgtgcttt
ggggatttgagttcagctcagatcctggaggcgtgcaactacgtctacgaagcaagtttc
acgcaccaagagagcgggacggacaccagtgccaaaatgctgacccatctggcatcaaat
ctccctgaactcctaacatttcggggcgttcccctcaacccgccagatgtgttcacagtg
caaaacgcgcgcagggcgggcggggctgagggcaggagcttctgtttggatctggaagac
tctgggatacagatctgtggacttaggacgttagtggccctcagcaacatcaacacatac
agggcctgcatagcagacgtcgtcaccctgtgggaggagctggagaagaggagcgacgag
ggtctcctgcaaggagcggtgtccaagttcaagatccatcctctgaaagccactcaggtc
tgtcacatagagcacctggaaaggctcgtcagcatacacaccagcaagaggctctcagac
agctccgaccaatcaaattccctcctggcagaaggggtgccagcagtcaaagagctgtac
aagctggagtttgagcttgacccagaaaacagtcccttggctcttcccaaactgtgggac
cttctccccgggctccataacctgcagcacttggacgtggaaaacagtaagatcggagac
aaaggagcagagaaactggcaaatgcgttagtctctcttcactcactggaagtactgaat
ttgtccgagaactgcataggcgaccagggagtgaagaagctagccctcgccttgaaggac
ctgcccaagctgcactgtctgagtctgtacagtaacgtgatttccgacgaaggggcagag
agtttagcagctgtgctcccacacatggcttcgcttacagacctcgacattaaatataac
aagatgacggatattggagcacaaagtttgggagccagtttgagaaagtgctctaaagtt
aagactttgaggatgtggaaccagtgtatcccatatggagtttttgagagacttaagcaa
caggacagccgcatcctctggcaataa
DBGET
integrated database retrieval system
