Poecilia latipinna (sailfin molly): 106948060
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Entry
106948060 CDS
T08005
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106948060 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106948060 (scarf1)
Membrane trafficking [BR:
plai04131
]
Endocytosis
Phagocytosis
Scavenger receptors
106948060 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
EGF_C8A_B_C6
Prominin
Motif
Other DBs
NCBI-GeneID:
106948060
NCBI-ProteinID:
XP_014888992
Ensembl:
ENSPLAG00000020828
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MRFLRALSALLCCSLSSPQTLDPGGKNVCKDSRDSYSPVCCTGWRQQGKECTIPVCEGEQ
ACLENEVCIFPGVCRCPPGFYGAQCKTECPLAFWAPDCRQVCPCHPHGRCNAVTGECTCY
PTRWGPLCQNTCQCSGNGHCDRVTGKCICDKGWWSQMCSKPCQCSSSGSVDSSCDPLTGR
CQCRRGYWGMKCRATCNCNQSTCNERTGVCECEAGSWGPSCDKNCKCDLSHSSCDPASGQ
CLCHPGYMGASCSRTCEAGYYGSSCKMRCGSCKDKRPCSSTDGACAACEPGLNGTRCDQP
CASGFYGEDCKDKCPRCWNSERCDPKTGKCWRCDPGWTGNRCEEPCSGGTYGDACRFLCS
PCFHGNCHHVTGRCVCQPGFQGESCNNTCPAPLFGLNCSSVCDCGEGVGCHPVTGACPYS
GRGAVLAGVLVPLFLLFFAVLCCCLCCGGGPADNKTSAAVTDGSMLVRMKYHVYSVLANI
GAALPCMSDWSSGLPRVTVSHHDPEVTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYCV
PPREDIPAVAGGEFQEMSSKCNMFLDPSGFSSEDIASSFNIPRTSSNAKSKRPSVSFAEG
TRFSPKERRGSGQDPGAPPRNKAKTPWGVLMLSALQSQGGTARTGEEDGAEIEERDDVEE
GQAMETQESSCEVLEQEADRSPNLQVPGTSGRRRTMSNTAAHKGTPLLNAEAEAGALHKV
TTVYVTVGKAGRPVTKTEPSSEGPVQAMLRRLGSLQRQKEQDGGRSKSKPAEGITKPPRR
KLGARAAVWEQGGPSGGEAKPVRRKNASSGISEAPPSEGNTPKRPLSSILKSVPEVAVGG
SGLRAMQGVDAAAGQTECSYLTVGPTGETTQAITNQGAANDEPCYENILISQP
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttctcagagctctgagcgctttgctctgctgctcgctgtcctctccacagaca
ctggatcctggtgggaaaaatgtctgcaaagattcaagggactcctacagtccggtctgc
tgcactggatggcgtcagcagggaaaagagtgcactatacccgtctgtgaaggcgaacag
gcgtgtcttgagaatgaggtctgtatatttcctggagtgtgtcgctgcccacctggcttc
tatggagctcagtgtaaaacagagtgtcctctggcgttttgggccccagactgccggcag
gtgtgtccgtgccacccccatggccgctgtaatgctgtcaccggcgagtgtacgtgctac
cccacccgctggggtcccctttgccagaacacctgccagtgctctggcaacggccactgc
gaccgtgtcactggaaaatgcatctgtgacaaaggctggtggtcccagatgtgctccaaa
ccatgccagtgctccagcagtggctccgtggactccagctgtgacccactaacaggccgc
tgccagtgccgcaggggctattggggcatgaaatgccgggccacgtgcaactgcaaccag
tctacgtgtaacgagcggaccggggtttgtgagtgcgaggcaggctcctgggggcccagc
tgtgacaagaactgtaaatgtgacctctcacacagcagctgtgacccggcctctgggcag
tgcctctgccacccgggttacatgggggcttcatgcagccgtacttgtgaagctgggtac
tatggcagcagttgtaaaatgagatgtggttcctgtaaagacaagcggccttgctcgtcc
accgacggtgcctgcgccgcctgtgaaccgggcctgaacggcacacgatgtgaccagcca
tgcgcttctggtttctatggagaagactgcaaggataagtgtccgcggtgctggaatagt
gaacgctgtgatccaaaaaccgggaaatgttggagatgtgaccctggatggaccggaaac
aggtgtgaggagccctgctcaggcgggacatacggggacgcctgccgcttcctgtgtagt
ccctgtttccatggtaactgtcatcacgtgacaggaagatgtgtctgtcagccaggtttt
caaggagaaagctgcaacaacacctgccccgctccgctgtttggcctcaactgttcgtcc
gtctgtgactgtggtgaaggagtgggctgccaccccgtcactggtgcttgcccctacagt
ggtcgaggtgctgtgctcgcaggcgtgctggttcccttgttcctgctgttttttgctgtg
ctgtgttgctgcctgtgttgcggaggaggtcccgctgacaacaaaaccagtgcggctgtg
actgacggcagcatgttggtcaggatgaaatatcacgtctacagcgtcctggcgaacatc
ggcgctgccctcccctgtatgtcggactggtcctccggcctgcctcgagtcactgtgtct
caccacgacccagaggtgactttcaaccacagcttcatcgagcctccctcttctggctgg
gtcaccgaggggtcgtccttcgacagtgacgaagaggagggcgaggctctctactgcgtt
cctccgagagaagacatcccggccgtggcgggcggggagttccaggagatgagctccaag
tgcaacatgttcctggacccgtccgggttcagcagcgaggacattgcttcgtccttcaac
atccctcggacctccagcaacgccaagtccaagaggccgtccgtgtcatttgcagagggg
acgcgctttagtcctaaggagaggcgtgggtcaggtcaggaccctggtgctcctccgcgt
aacaaagcgaagaccccctggggggttctgatgctgtccgcccttcaaagtcagggaggg
acagctaggactggggaggaagatggagctgagatagaggagagggacgatgtggaagag
ggtcaagcaatggagacgcaagagtcgagctgtgaggtgctggagcaggaagcagacaga
agcccgaatttacaagtccctgggacgtcagggcgaaggcggaccatgtccaacacagct
gctcataaaggaaccccgctgctcaacgctgaggctgaggcgggggctcttcacaaggtt
accacggtgtatgtgacagtcggtaaggctggcaggcctgtgacaaaaacagagccgagc
tctgaaggaccggtccaggctatgctgcgcagactcggcagtctgcagagacaaaaggag
caggacggcgggagatccaagtcgaagccagccgagggcatcaccaaaccgccgaggagg
aagctgggagctcgggccgccgtgtgggagcagggagggccgtcaggaggcgaggctaag
ccagtcaggcggaagaacgcctccagcggcatttcggaggctcctccatcagaggggaac
acgccaaaacggcccctgtcgtcgatcctgaagagcgtcccagaggtggccgtcggtggg
tcaggtctgagggccatgcagggtgtggatgcagctgcagggcagacagagtgcagctat
ctgacagtgggaccaacgggagagacgactcaggccatcaccaaccagggagcagcaaac
gacgaaccctgctatgaaaacatcttaatctcacaaccataa
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