Poecilia latipinna (sailfin molly): 106948390
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Entry
106948390 CDS
T08005
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03013
Nucleocytoplasmic transport
plai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106948390 (srrm1)
03015 mRNA surveillance pathway
106948390 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106948390 (srrm1)
03041 Spliceosome [BR:
plai03041
]
106948390 (srrm1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106948390 (srrm1)
Spliceosome [BR:
plai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
106948390 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
106948390
NCBI-ProteinID:
XP_014889503
Ensembl:
ENSPLAG00000006807
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASLKKVDQDKKDKDTRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVVGDSPPPPLMQSNTKMSQQQPEEPDTSGTGLPETVIQEASSTGLIDT
VVESVKADSLTEVKEPSPEKSLKKEERPRSREREKETRKERPHHRSRSRSHSRSRRRRSR
SRSYSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSSGSRS
PKKPVKRISTTPPRKQLHRPGASVSPVGKDKRSPSPRARRGRGSASPPRSSGVKRKPGGR
GDSPSDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPK
RSAAGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPGRRRRSPSPPRRRRSPSPPR
RRSPSPPPRRRSLSPRRYSPPIQRRYSPSPLPPQKRKLSSSPTKRFSPGPKRRSSRSPKR
RSSPVQRRRSPPSSSSPPRHRRSPLSARPNRDTRSPVMSARRLSPSPANRGRPVRRSTSP
QRRFDSSSTSPSAQRRQQSPPHSSKLIRRVSRTPEPRNKRISPSPKPIRRASSRSRSLSP
QPAAQKRPAPALAPASASPSPSRSASGSPPPPPPAKKATSGSGSQSPSKNSDVDGGGKKK
KKKKEKKHKKDKKHKKHKKHKKEKSSAAATGDVQESRPAEEDGDSRKESESEVDDALDDL
EKHLREKALRSMRKAQMSPSEMS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggcacgagtgcggagcaagacaaccgtttcagcaacaag
cagaaaaaattgctgaagcagctgaaatttgcagaatgtctcgacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggatcactcaacgtgtgactgagattctg
ggatttgaggatgatgtggtcatagagttcatattcaaccaacttgaagagaagcacccc
gacagcaagatgatgcagattaacctgacggggttcctgaatgggaagaacgcccgggag
ttcatgagggacctttggcccctgctgctgagcgcacaggagaacatcgctggcatcccc
tctgcttttctggagcagaagaaagaagaaatccgacagagacagattgaacaggagaag
cttgcttctttgaaaaaggttgaccaggataagaaggacaaggacacaagagaaaggact
cgatcaaagagcccaagaaggtggaagacgaggtctccagggaagcgtgaaaggaagcgt
agtccgtcgcgatccccagtgcgcaaacccagtccagttgttggagactccccccctcca
cctctgatgcagtccaacactaaaatgtctcagcagcagcctgaggagccagacacatca
ggaacaggcctgccagaaaccgttatccaagaagcttcgtctactgggttaattgacaca
gttgtagagtcagttaaagcagactctttgaccgaagtcaaagaaccgtccccagagaaa
tccctcaaaaaagaggaaagaccgaggtctcgtgaaagagaaaaggaaacaaggaaggaa
agaccccaccaccgctctcgctcacgttctcactctcgttctcgcaggcgacgctcccgg
tctagatcttactcccctcgtagaagacaaagtcccagaaggagaatgtctccccgtcgg
aggagtccccctagacgtggccccaccggctccaggcacagacaccggcggtctcctgtt
cgcaggaggcgttcccgttctgcttcatcttctggtagcagctcctcagggtcacgttca
cctaagaaacctgtgaagagaatatctaccacgccgccccggaaacagctccatcgtcct
ggtgcttctgtaagccccgttgggaaggacaaacgctcgccgtctccccgagccaggaga
ggccggggctccgcttccccgccaagatcatcaggtgttaagcgaaaacctggaggaagg
ggagattctccatctgactttgtaaaggccagaacctctgaggggtctgagtcagaggag
gataaaaatgaaaaaggggcaacagcagattcggtgcagcagcgacgtcaatatcgcagg
cagaatcaacagtcctcttcagattcaggatcttcctcctcagaagatgaaggacctaag
aggtcagcagcagggccaggcgccagaaatggtgaagtaaggaggaaacgcagccgtacg
ccttcacctcgtaggcgacatagagatccctccccgaggaggagacgttctccatctcct
ggacgcagacgtcgctctccttctccccctcgacgtcgtagatctccctcccctcccaga
cgcaggtctccttcccctcctccccgccgtcgctctctgtcccccagacgatattctccc
cctatccagcgccgctacagcccctcacctttgcctccacagaagaggaagctgtccagt
tctcccacgaagcgcttttctccaggccctaagcgacgctcctccagatcacctaaacgt
agaagctctcctgtacagcggcgacgctcgcctccttcctcctcgtctcccccgagacat
agaaggagcccactgtctgccaggccgaacagggacacccgatccccggtcatgtctgct
agacgcctatccccctcccctgctaaccgaggtcgccctgttcggcggtccactagtccc
cagagacgctttgattcgtccagcacgtccccctccgcccaacgaagacagcagtcccct
ccacatagcagtaagctcatccgtagggtgtctcgcaccccagagccgcgtaacaaaaga
atctctcccagtccgaagcctataagaagagcttcgtccagatcccgatcgctttcccct
caaccggcagctcagaaacgtccggccccggctctggccccggcctcagcttccccgtca
ccttcccgctccgccagcgggtctccacctcctcctcccccggccaaaaaggctaccagt
ggttctggcagtcagtctcccagcaagaattcagatgttgatggtggtggaaagaaaaag
aagaagaagaaggaaaagaaacacaagaaagataagaagcacaaaaagcacaagaagcat
aagaaggagaaaagcagtgctgctgcgaccggagacgtccaagagagtcgacctgcagag
gaagacggcgattcgagaaaggaatcggagagtgaagtcgatgacgccttagacgatctg
gaaaagcacctccgagaaaaggcactgcgctcaatgaggaaggcccagatgtctccttca
gagatgtcctga
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