KEGG   Poecilia latipinna (sailfin molly): 106948652
Entry
106948652         CDS       T08005                                 
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    106948652 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plai03400]
    106948652 (msh2)
DNA repair and recombination proteins [BR:plai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     106948652 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 106948652
NCBI-ProteinID: XP_014889942
Ensembl: ENSPLAG00000001517
UniProt: A0A3B3V3B6
LinkDB
Position
Unknown
AA seq 937 aa
MAVQPKQNQNLSLDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVF
KTNGVIKYLGSGSRKLESVILSKLNFEAFVKDLLLVKQYRVEVYRNHSKSSKEHDWRIEY
KASPGNLTQFEDILFGGGTGGEGCAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFP
DNEIFSNLESLLVQISPKECLLTQGECSAEGTKLREVVQRGGVLVSDRKRAEFSSKDIVQ
DLNRLLRSKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTMLQLGQY
MRLDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMEKTKIEER
LDLVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHTATLQDCHRVYEAVSHIPALIT
ALESYSGSYKVLLHAVFTSPLADLQTDFIKYQEMIETTLDMNQIEHHEFLVKASFDPVLS
ELREKMDALEKSMQAVLSSAARELGLEAGKTVKLESNAVLGFYLRVTCKEEKSLRNNKKF
TTLDVQKNGVRFTNSKLSSLNEEYTRSREEYEEAQNAIVKEIINIASGYVDPLQTLSDVI
AQLDAVASFAVASVSAPVPYVRPRLLDDGRRRLELLQARHPCMETDADTAFIPNDISFVQ
GEKSFYIITGPNMGGKSTFIRQVGLIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQV
KGVSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHISSKIGCFCL
FATHFHELTALAAQQPSVNNLHVTALTTHNTLTMLYRVKPGVCDQSFGIHVAELACFPPS
VLEVAREKAEELEEFQEPVGDDSKQDEEPGVKRRRTDKQVGENLIQDFLEKVKALPVATM
TEEEVKAELRRIKQDLVAKNNTYISEILARCTPVKSA
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggcggtgcaaccgaagcagaaccaaaacctgtccctggacagcgcggccgaacacggc
tttctgaacttcatattctctatgccggagaaaccggacacaaccttcaggatattcgac
cggaacgactactacaccgtccacgggaaggacgccatatttgctgccaaggaggttttt
aagactaacggagtcatcaaatatctgggctcagggagccgtaagctggagagcgtgatc
ctgagcaagctgaacttcgaggcctttgtgaaggatctgttgctggtgaagcagtaccga
gtggaggtatacaggaaccacagcaagagcagcaaggaacacgactggaggatcgagtac
aaggcctctccaggaaacctgacccagttcgaggacattctgttcggcggaggaaccgga
ggcgagggatgcgcgggagtggtcgccgtgcggtttgcgacgggagccgacgggcagcga
gtggtcggggtcggctacgtggacgcggcccagaggaccatgggggtgtgtgagtttccg
gacaacgagatcttctccaacctggagtctctgctcgtccagatcagccccaaagagtgt
ctgctgactcagggagaatgcagcgctgaggggaccaagctccgggaggtggtgcaacgt
ggcggtgttctggtctctgacaggaagagagcagagttcagcagcaaggacatcgtccag
gatctcaacaggctactgcgatccaagagaggagaaacggtggcgagcaacacgctgcct
gaactggacaagcaggtggccatgtcatgtttggctgctgtggttcgattcctcgagctt
ctctccgacgagtccaacttcaactctttcagcctcactatgctgcagctgggtcagtac
atgaggctggacaacgccgccgtcagggctctcaacctcttccagggttcgcccgacgac
accagtggagctcattcattggccggtttgttgaacaagtgccgcactccgcagggtcag
cggctggtcaaccagtggatcaaacagccacttatggagaaaaccaaaatagaggaaaga
ctggaccttgtggagagtttcgtgtgcgactcggagctgaggcagacttgtcaggaggat
ctgctgcgacgctttccagatctccaccgcctggccaaaaagtttcaccgtcacacggcg
acgctgcaggactgccaccgcgtctacgaggccgtgagccacatccccgctctcatcacg
gctctggagagctactcgggcagctacaaggtgttgctgcacgcggtgttcacctcgcct
ctcgctgacctgcagacggatttcatcaagtaccaggagatgattgaaaccactctggac
atgaatcagatcgaacaccacgagttcctggtgaaggcgtcgttcgatcccgttctgagt
gagctcagggagaagatggacgccctggagaaaagcatgcaggctgtgctgagcagtgca
gccagagaactaggtctggaagccggtaagacggtgaagctggagtccaacgccgtgctg
ggcttctacctgcgggtcacgtgcaaggaggagaagagtttgaggaacaacaagaagttc
accacactggacgttcagaagaacggcgttcgcttcacaaacagcaagctgagctctctg
aacgaggagtacaccaggagcagggaggagtacgaggaggcccagaacgccatcgtcaaa
gagatcatcaacatcgcctcaggttatgtggatccccttcagacgctgagtgacgtcatc
gcgcagctcgacgcggtggccagcttcgctgtggcgtcggtgtccgctccggttccttac
gtccggccccgactgctggacgacggccgcaggcgtctggagctgctgcaggccagacat
ccctgcatggagacggacgcggacaccgccttcatacccaacgacatcagcttcgtccag
ggggagaagagcttctatattataacaggaccaaacatgggagggaagtccacgtttatc
cgtcaggtgggtctgatcgcgctgatggctcagatcggctgcttcgtgccatgcgagaag
gcggagctcagcgtgatcgacagcgttctggcccgagtgggagcaggagacagccaggtg
aagggagtgtccaccttcatgtctgagatgttggaaaccgccgccatcctccgctctgcc
acggaaaactccctcatcatcatcgacgagctcggcaggggaacctctacgtacgacggc
ttcgggctggcctgggccatcagcgaacacatctcctccaaaatcggctgcttttgcctc
ttcgccacgcacttccacgagctgaccgccttggcggcacagcagccgtccgtcaacaac
ctgcatgtcaccgccctgacgacccacaacacgctcacaatgctgtaccgagtcaaacca
ggtgtgtgtgaccagagttttgggatccacgtcgccgagctggcctgcttccccccgtcg
gtgctggaagtggcgagggagaaggcggaggagctggaagagttccaggaacctgtgggc
gacgattcgaagcaggatgaagagcccggggtcaagagacggcggacagataagcaagtg
ggagaaaacctgatccaggacttcctggagaaggtgaaggcacttcctgtcgccaccatg
accgaggaggaggtgaaggcagagctcaggaggataaagcaagatttggtggccaaaaat
aacacgtacatcagtgagatacttgcccgctgcactcctgtaaaatctgcctga

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