Poecilia latipinna (sailfin molly): 106948652
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Entry
106948652 CDS
T08005
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106948652 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plai03400
]
106948652 (msh2)
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106948652 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
106948652
NCBI-ProteinID:
XP_014889942
Ensembl:
ENSPLAG00000001517
UniProt:
A0A3B3V3B6
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MAVQPKQNQNLSLDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVF
KTNGVIKYLGSGSRKLESVILSKLNFEAFVKDLLLVKQYRVEVYRNHSKSSKEHDWRIEY
KASPGNLTQFEDILFGGGTGGEGCAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFP
DNEIFSNLESLLVQISPKECLLTQGECSAEGTKLREVVQRGGVLVSDRKRAEFSSKDIVQ
DLNRLLRSKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTMLQLGQY
MRLDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMEKTKIEER
LDLVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHTATLQDCHRVYEAVSHIPALIT
ALESYSGSYKVLLHAVFTSPLADLQTDFIKYQEMIETTLDMNQIEHHEFLVKASFDPVLS
ELREKMDALEKSMQAVLSSAARELGLEAGKTVKLESNAVLGFYLRVTCKEEKSLRNNKKF
TTLDVQKNGVRFTNSKLSSLNEEYTRSREEYEEAQNAIVKEIINIASGYVDPLQTLSDVI
AQLDAVASFAVASVSAPVPYVRPRLLDDGRRRLELLQARHPCMETDADTAFIPNDISFVQ
GEKSFYIITGPNMGGKSTFIRQVGLIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQV
KGVSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHISSKIGCFCL
FATHFHELTALAAQQPSVNNLHVTALTTHNTLTMLYRVKPGVCDQSFGIHVAELACFPPS
VLEVAREKAEELEEFQEPVGDDSKQDEEPGVKRRRTDKQVGENLIQDFLEKVKALPVATM
TEEEVKAELRRIKQDLVAKNNTYISEILARCTPVKSA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaagcagaaccaaaacctgtccctggacagcgcggccgaacacggc
tttctgaacttcatattctctatgccggagaaaccggacacaaccttcaggatattcgac
cggaacgactactacaccgtccacgggaaggacgccatatttgctgccaaggaggttttt
aagactaacggagtcatcaaatatctgggctcagggagccgtaagctggagagcgtgatc
ctgagcaagctgaacttcgaggcctttgtgaaggatctgttgctggtgaagcagtaccga
gtggaggtatacaggaaccacagcaagagcagcaaggaacacgactggaggatcgagtac
aaggcctctccaggaaacctgacccagttcgaggacattctgttcggcggaggaaccgga
ggcgagggatgcgcgggagtggtcgccgtgcggtttgcgacgggagccgacgggcagcga
gtggtcggggtcggctacgtggacgcggcccagaggaccatgggggtgtgtgagtttccg
gacaacgagatcttctccaacctggagtctctgctcgtccagatcagccccaaagagtgt
ctgctgactcagggagaatgcagcgctgaggggaccaagctccgggaggtggtgcaacgt
ggcggtgttctggtctctgacaggaagagagcagagttcagcagcaaggacatcgtccag
gatctcaacaggctactgcgatccaagagaggagaaacggtggcgagcaacacgctgcct
gaactggacaagcaggtggccatgtcatgtttggctgctgtggttcgattcctcgagctt
ctctccgacgagtccaacttcaactctttcagcctcactatgctgcagctgggtcagtac
atgaggctggacaacgccgccgtcagggctctcaacctcttccagggttcgcccgacgac
accagtggagctcattcattggccggtttgttgaacaagtgccgcactccgcagggtcag
cggctggtcaaccagtggatcaaacagccacttatggagaaaaccaaaatagaggaaaga
ctggaccttgtggagagtttcgtgtgcgactcggagctgaggcagacttgtcaggaggat
ctgctgcgacgctttccagatctccaccgcctggccaaaaagtttcaccgtcacacggcg
acgctgcaggactgccaccgcgtctacgaggccgtgagccacatccccgctctcatcacg
gctctggagagctactcgggcagctacaaggtgttgctgcacgcggtgttcacctcgcct
ctcgctgacctgcagacggatttcatcaagtaccaggagatgattgaaaccactctggac
atgaatcagatcgaacaccacgagttcctggtgaaggcgtcgttcgatcccgttctgagt
gagctcagggagaagatggacgccctggagaaaagcatgcaggctgtgctgagcagtgca
gccagagaactaggtctggaagccggtaagacggtgaagctggagtccaacgccgtgctg
ggcttctacctgcgggtcacgtgcaaggaggagaagagtttgaggaacaacaagaagttc
accacactggacgttcagaagaacggcgttcgcttcacaaacagcaagctgagctctctg
aacgaggagtacaccaggagcagggaggagtacgaggaggcccagaacgccatcgtcaaa
gagatcatcaacatcgcctcaggttatgtggatccccttcagacgctgagtgacgtcatc
gcgcagctcgacgcggtggccagcttcgctgtggcgtcggtgtccgctccggttccttac
gtccggccccgactgctggacgacggccgcaggcgtctggagctgctgcaggccagacat
ccctgcatggagacggacgcggacaccgccttcatacccaacgacatcagcttcgtccag
ggggagaagagcttctatattataacaggaccaaacatgggagggaagtccacgtttatc
cgtcaggtgggtctgatcgcgctgatggctcagatcggctgcttcgtgccatgcgagaag
gcggagctcagcgtgatcgacagcgttctggcccgagtgggagcaggagacagccaggtg
aagggagtgtccaccttcatgtctgagatgttggaaaccgccgccatcctccgctctgcc
acggaaaactccctcatcatcatcgacgagctcggcaggggaacctctacgtacgacggc
ttcgggctggcctgggccatcagcgaacacatctcctccaaaatcggctgcttttgcctc
ttcgccacgcacttccacgagctgaccgccttggcggcacagcagccgtccgtcaacaac
ctgcatgtcaccgccctgacgacccacaacacgctcacaatgctgtaccgagtcaaacca
ggtgtgtgtgaccagagttttgggatccacgtcgccgagctggcctgcttccccccgtcg
gtgctggaagtggcgagggagaaggcggaggagctggaagagttccaggaacctgtgggc
gacgattcgaagcaggatgaagagcccggggtcaagagacggcggacagataagcaagtg
ggagaaaacctgatccaggacttcctggagaaggtgaaggcacttcctgtcgccaccatg
accgaggaggaggtgaaggcagagctcaggaggataaagcaagatttggtggccaaaaat
aacacgtacatcagtgagatacttgcccgctgcactcctgtaaaatctgcctga
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