Poecilia latipinna (sailfin molly): 106948746
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Entry
106948746 CDS
T08005
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03013
Nucleocytoplasmic transport
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106948746 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
106948746 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106948746 (thoc1)
03041 Spliceosome [BR:
plai03041
]
106948746 (thoc1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106948746 (thoc1)
Spliceosome [BR:
plai03041
]
Complex C
Other components
EJC/TREX
106948746 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106948746 (thoc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DUF7386
Motif
Other DBs
NCBI-GeneID:
106948746
NCBI-ProteinID:
XP_014890075
Ensembl:
ENSPLAG00000019648
UniProt:
A0A3B3USM9
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MSPPVFNFVDVKEKFTAAARQALSGKTCKHLITVFSQISGNETEKKTTLDQALRGVLGDQ
IIEQKMSCDDYLSLIYLSIDAVTEGICSATIPFVLLGDVLDCLPLDLCDKIFSFVEKNVS
TWKSSSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKQTDEKEDTMEVEEGEMGEDDAPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYDKFSWMTFLKFSDETLAVFKSFKLDDMQASKRKMEDLRASDGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCILNDDQSAWIEETTKLV
YQLLRETPPEGEQFATMVEHILNTEENWNSWKNEGCPSFVKERTSDDKPKRPTRKRQAPE
DFLGKGPERKIFMGNDELTRLWNLNQDNMEACKSESREFMPSLDEFFAEAIEQADPVNMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDTMVCKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQSKTVTNHQMDDIAAKLGSQWKTLASHLEMKAAE
MREIETDSEDVDVQAKLLLVAWQEREGSQATVENLATALSAAGFSQLAERLSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccccgtattcaattttgtcgatgtcaaggagaaatttacggctgctgccaga
caggctctctcgggtaaaacctgcaaacatctaatcactgtgtttagccagatctccgga
aatgagacagaaaagaagaccacactcgaccaggccctgcggggtgttctcggtgatcaa
attattgagcagaagatgagctgtgacgactatctgtctctcatctacctgagtatcgat
gctgttactgagggaatctgctctgccacaatcccattcgtcctgctgggagatgtactg
gactgccttccccttgacctgtgtgacaaaatattctcctttgttgagaaaaatgtctcc
acctggaaatcgagctcattctacacggcaggaaagaactatctgctgagaatgtgcaac
gatcttctgaggaggctgtccaaatcccagaatactgtattctgtgggcgaatccagctt
ttcctggcacgactcttccctctatctgagaaatctggtctgaatctgcagagtcagttt
aatctggacaacataacagtgttcaacaagaatgagcaggagagcactcttggccagaag
cagacggatgaaaaggaagacacaatggaggtggaggaaggtgaaatgggggaggatgat
gcacctgcgccctgttctatcccaattgattacaacctatacagaaagttctggacgttg
caggactacttcagaaatccggtgcagtgctacgacaaattctcatggatgacgttcctt
aagttttcagacgagaccctcgccgtattcaagagcttcaagctggatgacatgcaggcc
tctaaaaggaagatggaggacctcagagcctctgacggcgaacacgtctattttgccaaa
ttcctcacaagtgagaagctgatggacttgcagctcagcgacagcaacttcagacggcat
atactgctgcagtacctgatcctcttccagtaccttaagggacaggttaaattcaaaagc
tccagctgcattctgaacgacgaccagagtgcatggattgaggagacgacgaagctagtt
tatcagctgctgagagaaacgcctcctgaaggagaacaattcgccaccatggtggagcac
attctcaacacggaggaaaactggaactcctggaagaacgagggctgtccgagcttcgtg
aaagaaagaacatctgacgacaaacctaaaaggcccaccaggaaaagacaagctccagag
gacttccttggaaaagggccagagcgcaagatcttcatgggaaatgatgagttgactcga
ctgtggaacttgaaccaggacaacatggaggcctgcaagtctgaaagcagagagtttatg
ccatcactggacgagttctttgcagaagccattgagcaggccgatccagtcaacatggtg
gaggaggaatataaggttgtgcgtaacccaaactacgggtggcgggctttgaggctcctg
tccaggaggagtccacacttctttcagccaacgaaccagaagttcaaaagcctggcagac
tacctagacaccatggtctgcaaactggccaaagagctgccgaaggatatcccttcagaa
gaaatcaagacaggagaggaggatgatgacgataatggagacaatcttcttaaagacagc
aatgacagtccgagcatccagagtaaaactgtaacaaaccatcagatggacgacatagca
gccaaactggggtctcagtggaagacgctggcgtctcatctggagatgaaggcagcagag
atgcgggaaatcgagacggacagtgaagatgtggacgttcaggccaagcttctgctggtg
gcctggcaggagcgagagggatcccaagcaacagtggagaacctggcaacggctctcagc
gcggcagggttctcccagcttgcagaacgcctcagtgaggcttga
DBGET
integrated database retrieval system
