Poecilia latipinna (sailfin molly): 106949346
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Entry
106949346 CDS
T08005
Name
(RefSeq) nuclear receptor ROR-alpha-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plai03000
]
106949346
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plai03310
]
106949346
Transcription factors [BR:
plai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106949346
Nuclear receptors [BR:
plai03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106949346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106949346
NCBI-ProteinID:
XP_014891003
Ensembl:
ENSPLAG00000023175
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MESSRQDSVTDAVRSRSQPGEAAAETPLPAAGRTHSRSDSSGSSQSKGLSAAVKKTHASQ
IEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNASYSCPRQKNCQIDRTSRNRCQH
CRLQKCLAAGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQAPSRSSPSVSSPSLDEA
ESPSPPYTLCSAGLTDPADDPACYMDRTSPDGGSLTSKAESGAGDAGCGGFYLDIQPSPD
QSGLDINRVKPEPLHDYRHGDGNGFFPYCSFSNGDASPTLTLAEHGESTEHDHLAQIICK
SHLETCQYLREELQEMSWQSFLQEEVEKYQNKPQEAMWQLCAVKITDAVQYVVEFAKRID
GFMDLCQNDQIVLLKAGSLEVIFVRMCRVFDSQNNTVYFDGKFASPDVFKSLGCDDLISS
VFDFGQSMCSLQLTEEEIALFSAFVLLCADRSWLREKLQVEKLQRKTESALQHVLQKNHR
DDGVLEKLRCKALALRALCGLHSEKLAAFRTVYPDAVRTLFPPLYKELFAADLDGTLH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtcccgacaggattcggtaactgacgcggtaaggagtcgctcgcagcccggt
gaagccgccgcggagaccccgctccccgcagcgggcaggacgcacagccgctccgactcc
tccgggtccagtcaaagcaaaggtttgtcagcagctgtgaagaagacgcatgcttctcag
attgagatcatcccctgtaagatctgtggagataaatcctcagggatccactacggcgtc
attacctgcgagggctgcaagggtttcttcaggcggagtcagcagagcaacgcctcgtac
tcgtgtccgcggcagaaaaactgtcagatcgaccgaacgagccggaaccggtgtcagcac
tgtcgcctgcagaaatgcctggctgccggcatgtccagagacgccgtgaagttcggccgc
atgtcgaagaagcagcgggacagtttgtacgccgaggtccagaagcaccggctccagcag
cagcagcaggcacccagccggtcctcccccagcgtcagcagccccagcctggacgaggct
gagtcgccgtctcccccgtacacgctgtgctccgcgggcctcacggacccagcagacgac
ccggcctgctacatggaccggacctcaccagacggaggatctctgacctccaaggcggag
tcgggagcaggagacgcaggatgtggaggtttctacctggacatccagccgtctccggac
cagtccggactcgacatcaacagagtcaaaccggagccactgcacgactacagacacggc
gacggcaatggcttcttcccttactgctccttcagcaacggagatgcttctccaaccctg
accttggccgaacacggtgagtccaccgaacacgatcacttggcccaaatcatctgcaag
tctcacctggagacgtgtcagtacctgagggaggagctgcaggaaatgagctggcagagt
ttcctgcaggaagaggtggagaagtatcagaacaagccacaggaggcgatgtggcagctt
tgtgcagtgaagatcacagacgccgtccagtacgtggtggagttcgccaagcgcatcgac
ggcttcatggatctctgccagaacgaccagattgtgctgctgaaagccggatctttagag
gtcatcttcgtacgaatgtgtcgggtttttgactctcagaacaacaccgtctacttcgat
gggaaatttgcaagtcctgacgtttttaaatcattaggctgcgatgatttgatctcgtca
gtgtttgactttggtcagagcatgtgttcgctgcagctgaccgaggaagagatcgccctc
ttctccgcgttcgttctgctctgtgcagaccggtcgtggctgcgggagaagctgcaggtg
gagaagctgcagcggaaaaccgagtcggccctgcagcacgtcctgcagaagaaccacaga
gacgatggagttctggagaagctgcggtgcaaggcgttggcgctgcgcgctctctgcggc
ctccactcggagaagctcgcggcgttcagaaccgtctacccggacgcggtccgaacgctc
ttccctccgctctacaaggagctgtttgctgccgacctggacgggactctgcactga
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