Poecilia latipinna (sailfin molly): 106949486
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Entry
106949486 CDS
T08005
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03013
Nucleocytoplasmic transport
plai03015
mRNA surveillance pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106949486 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
106949486 (ncbp1)
03015 mRNA surveillance pathway
106949486 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106949486 (ncbp1)
03041 Spliceosome [BR:
plai03041
]
106949486 (ncbp1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106949486 (ncbp1)
Spliceosome [BR:
plai03041
]
Common components
Common spliceosomal components
Cap binding complex
106949486 (ncbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
HmpF
AAA_13
Vfa1
RRF
AAA_11
Importin_rep_6
DUF1690
DUF1664
PHM7_cyt
WIT1_2_N
Motif
Other DBs
NCBI-GeneID:
106949486
NCBI-ProteinID:
XP_014891231
Ensembl:
ENSPLAG00000020002
UniProt:
A0A3B3USS5
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVVIFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPIPRVIFRMFDYTDAPEG
PVMPGSHSAERFVIEENLHCIIKTHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPLPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHH
LSNFQFRWSWDDWADCLTLDLEKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PIFSFKYGDESGTSLPGYPVSITVSNAIKNRASNEEILAILKEVPNPNQEDDDDEGESFN
PLKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKNLTESDDGKLHILKVVYEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKRRDSGDDEDMEKNSEEDEEGQLEEQIERLQEKVESAQSEQKNLFLVIF
QRFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQVFLMHHGTIQQYMGTLENLLFTAEL
DHHILAVYQQFCALQL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaggcgacatagcgatgagaacgacggaggtcaagctcataagaggaggaga
acatctgagcccattgaaattgaagatcgcctggagtcgttgatatgtcgcgtaggagaa
aaaagcacttcatccctcgagagcaacctcgagggcctcgcaggcgtcctggaggccgac
cttcccaactacaaaaacaaaatcctgcgtatattatgtgctgttgctcgcctgctgcca
gagaagctcaccgtctacacaacgttagtcggtctcctcaatgccagaaactacaacttt
ggtggcgagtttgtggaggcgatgatcaggcagctgaaggaaaccttaaaaaacaatctg
tataatgaagcagtttacctggtgcgctttctgtctgatttggttaactgccatgtcatc
gccgctccatctatggtggtaatatttgaaaattttgtcagtgttactcaagaggaagac
gtgccacaggttcgatcggactggtttgtgtatgtcgttctgtcctgccttccctgggtc
ggaaaggagctttatgagaagaaggatgttgaaatggaccgactcctcagtcagattgaa
ggctacctcaagaggagagtgaagactcatgttcccatgctgcaggtgtggacagcagag
aaaccccatccccaggaagagtacctggactgtctgtgggcccagatccagaagctgaag
aaagaccgctggcaggagcgccacatccttcgtccgtacatcgccttcgacagcgttctc
tgtgaggcgctgcagcacaacctgcccccgttcactccgccgggacacatgcctgatgcc
cagtaccccatcccccgggtcatcttccgcatgttcgactacaccgatgccccagagggt
cccgttatgccgggcagccattctgcagagcggtttgtgattgaagaaaacctgcactgt
atcatcaaaacccactggagagagaggaaaacatgtgctgcccagctgctcagttaccct
ggaaaaaacaagatcccactgaactaccacatcgtggaggtgatctttggagaacttttc
cagctgccattaccgccccacatcgacgtcatgtacactacgctcctcatcgagctctgc
aagctgcagccagggtcactccctcaagttctggcccaggccacagagatgctttacatg
aggctggatacaatgaacaccacctgcatagacagattcatcaactggttttcccatcat
ttgagcaacttccagtttcgatggagctgggatgactgggcggactgtttgacattggat
ttagagaaaccaaagcccaagtttgtcaaagaggttctggagaaatcgatgagactttca
taccatcagaggatcgtggacattgtccctccaactttctccgcccttatccctgctgag
cccatcttttctttcaaatacggagatgagagtggcacctcgttaccaggttacccagtt
tccattacagtttccaatgccataaagaaccgagcgtccaacgaggaaatcctcgccatc
ctcaaagaagtccccaacccaaaccaggaggatgatgatgatgagggtgaaagcttcaac
ccactgaagatcgatgtgtttcttcagactctcctccatctggcagcgaagtccttcagc
cattccttcagcgcgctcggcaaattccatgagatccttaaaaacctgacagaaagcgac
gacgggaagctgcacatcctgaaagtggtttatgaggtgtggaggaaccaccctcagatg
atcgccgtgttggtggataaaatgattcggacgcagatcgtggattgtgccgctgtggct
aactggctcttctctcaggacatggctcacgagttcaccagacttttcatctgggagatt
ctgcactcaaccatccgaaagatgaataaacacgtgcagaagatccagaaggagctggag
gaagctaaagataagctggagaaacagcagcacaagaggagggacagcggggacgacgag
gacatggagaagaacagcgaggaggacgaggagggtcagctggaggagcagattgagagg
ctgcaggagaaggtggagtcggctcagagcgagcagaaaaacctcttcctcgtcatcttc
cagcgcttcatcatgctgctgacggagcatctggttcgctgcgagacgggcagcgttgac
atcagcacaccctggtataaaaactgcatcgagcggctgcagcaggtcttcctcatgcac
catggaaccatccagcagtatatgggaactctggagaacctgctgttcaccgctgagctc
gaccatcacatcctggccgtctaccagcagttctgcgcgctgcagctctga
DBGET
integrated database retrieval system
