Poecilia latipinna (sailfin molly): 106949593
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Entry
106949593 CDS
T08005
Symbol
lsm2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03018
RNA degradation
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106949593 (lsm2)
09123 Folding, sorting and degradation
03018 RNA degradation
106949593 (lsm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106949593 (lsm2)
03041 Spliceosome [BR:
plai03041
]
106949593 (lsm2)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106949593 (lsm2)
mRNA degradation factors
5'-3' decay
Lsm complex
106949593 (lsm2)
Spliceosome [BR:
plai03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106949593 (lsm2)
Complex C
U2 snRNP components
106949593 (lsm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
106949593
NCBI-ProteinID:
XP_014891441
Ensembl:
ENSPLAG00000017165
UniProt:
A0A3B3VTF3
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcatttttcaagtcgctagtggggaaggacgtagtggtggagctcaaa
aacgacctgagcatctgtggaacgcttcactctgttgaccagtacctgaacatcaagttg
acagacatcagcgtcacagatccagagaaatatccacatatgctgtcggtgaaaaactgc
ttcatccgtggatcggtggtccggtacgtccagctgccggccgacgaggtggacacgcag
ctgctccaagacgcagcgcgaaaagaagccatgcagcagaagcagtga
DBGET
integrated database retrieval system
