Poecilia latipinna (sailfin molly): 106949624
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Entry
106949624 CDS
T08005
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106949624 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106949624 (edc4)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106949624 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
106949624 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Prp19
WDR55
SYCP2_ARLD
Band_7
Motif
Other DBs
NCBI-GeneID:
106949624
NCBI-ProteinID:
XP_014891500
Ensembl:
ENSPLAG00000015364
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MIRVLSLDFSERSLLKGFTGAVTDLAFAHLDSSLLGCVDEAGNLMVWHLTLTRSKILDQI
VVHIQRPEDAPLNSHRRLIWCPYILEDSEENQDDTSQTLALLHEDRAEVWDLEVLRANNS
SWPVDASEIKDGLIIVKGHTQRVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRC
LHELRPHEGRPLSCLLFCDNHKRQDPEVPFWRFLITGADQNQELKLWCTVSWTCLQTIRF
SPDPFNSTVLPSLKASLDLAAEYLILTDVQRKVLYVMELRQDLEKGKASFTAVSEFLLTH
PVLSFGVRDVTHSRLRHTEVLPAEEESESMSTEGTQGPAESKSGIQIKLYCVHTKSLQDV
QIWFQPNAGFNTPGFIPHSDSQDGFAGFPDHLTDQSSDKDSGSGSQSDLRKIPSLPVPSD
FLSNSGASGGSMPKLMTPDAFMTPSTSVPASPGSSASSLTIVTAISSNSDSTNRAMDDIS
QSPIRGENNGGSSLGLSVATSSPRAAPAVLLPGLENLQALASPSGPLGLDSPQVPDSPLL
LPLTSPTRARSPDVISSASTVMSQDMPEIATQTLQLQRSHGLEALQLPALQTDSMASAAC
ALHLLTSPRAATNNGLLPLELGGADGSSMADDSESRLSNKPSLLENTLSQENTGVSGGSS
DGSVSHTSWPAAPDITRETRNSLRDNGLGECLRDESSERRLSSPYHRRSYHLVQNDSQDV
GVDQSDPDDEIASLASSSGNCGSRSSHRMPVKDWKSSPRGSPKLKRKLKKDDNESSQPRH
MDPGQFNTETQDELLMLLRSQQRELADLCSLVETMPGTIMAQVEHVLMKHQEQEQRRLDR
ALAENQSRQQQLHEQLSQQLSHALSTALTNRMDKVLREELKKAVPQTISKSLEPVTGQLN
NSIAAKMAAVEVTIKDIVIKVVKSKNTTDAMGRAAAEAMQGPIQAAYKDVFQSTVLPVFE
RGCQSMFQQINDSFKQGTQDYIQQLEAHLKSRKQREQEARDPVIGQLQQAIDGFQSCTDQ
LASSVSAAVRAEVQHQMQVVVGNLQDSILSQLQRIVKGEVSLAMREQQAVVTSSIMQAMR
SAAGTPVPTAHLDYQSQQANILQLLQQGQLNQAFQQVPTRPRHHRSH
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgtgctgagtttggatttcagtgagcgctccttgctgaagggcttcactggc
gccgtcacggatctcgctttcgcccacctcgactcctctctgttgggctgcgtggatgag
gcgggaaacctgatggtctggcatctcacactcacgagaagcaaaatactggatcagata
gtggttcatattcagcgtccagaagacgctccactgaactcccacagacgcctcatctgg
tgcccttacatcttggaagacagcgaggagaatcaggacgacaccagccagacgctggca
ctcctgcatgaggacagggctgaggtttgggacctcgaagttttgagagccaataacagc
agttggccagttgatgcctcagaaatcaaagatggcctcattatagttaaaggacacaca
cagagagtcagtgaaggtgctctgtcccctgatgggaccgttttggccacagcgagccac
gacggttacatcaagttctggcagatctacatagaaggaggacaagataagcccagatgt
ctccatgaactccgacctcacgaaggacgtcctctctcctgtcttctcttctgtgacaac
cacaagcggcaggacccagaagttccgttctggaggtttctcataactggagcagaccag
aaccaggagttgaagctgtggtgcacagtttcctggacctgcttgcaaaccatcaggttt
tctccagatccattcaactctacggttcttcccagtctgaaggccagtttagatcttgct
gctgaatacttgatcctcactgatgtgcaaagaaaggtcctctatgtgatggagctgcgg
caggacctggagaagggcaaagcgagcttcacggccgtgtcggagttcctgctcacccac
cctgtgctcagcttcggggtgcgcgacgtgacccacagccgcctgaggcacaccgaggtt
ctgccagcggaggaggagagcgagagcatgtcgacagagggcactcaaggacctgcagag
tccaaatctgggatccaaattaaactctactgtgttcacacaaagagtttgcaggacgtc
cagatctggtttcagcccaacgcggggttcaatacgccgggttttattccccactctgac
tcccaagatggttttgctgggtttccggaccacctcaccgaccagagctccgacaaagat
tctggaagtggctcgcagtccgacctgaggaagatcccctcacttcctgttccctctgac
ttcctgtccaactctggggcatccggcgggtcgatgcccaagctgatgactcctgacgcc
ttcatgacaccaagcacttcggttcctgcgtctcctggcagcagcgccagcagtctgact
attgttacagccatcagcagcaactctgactcgacaaatagagccatggacgatatcagt
cagagtcccatcagaggagaaaacaacggcggcagcagtttgggactctctgtcgccacc
agcagtccgagggctgcacctgcagttctgctgcccggactggagaatctgcaggctctg
gcttcccccagtggccctctgggcctcgactcgcctcaggtcccagattctcctctgctg
ctgccgctgacctcgccgacccgggcccgctccccagacgtcatctcctccgcctccacc
gtgatgtcgcaggacatgccggagatcgcgacgcagacgctgcagctgcagcgcagccac
ggcctggaagccctgcagcttcctgcgctgcagacggacagcatggcctccgctgcatgt
gctctgcacctcctgacatcgccgcgcgccgccaccaacaacggtttgttgccccttgaa
ctcggaggtgctgacggctcgtcgatggcggacgattcggagtccagactcagtaacaaa
ccgtctcttctggagaacacgttgtcgcaggaaaacactggggtcagtggagggtcgtcg
gatggcagcgttagccacacgtcatggccggcggctccagacatcaccagggaaaccagg
aacagcctcagggacaacgggctgggagaatgtttgagagacgagtcaagcgagcgccgc
ttgagctctccctaccaccggcggtcctaccacctcgtccagaacgacagccaggatgtc
ggcgttgatcagagcgatcctgatgacgagatcgccagcctggcttcgtcctctgggaac
tgcggctctcgctcctctcacaggatgccggtgaaagactggaagagctcgccacgaggc
tcaccgaaactgaagaggaaactcaagaaagatgacaatgaatcttctcagcccaggcac
atggatcccggtcagtttaacacagagactcaggatgagctcctgatgctgctgcgcagc
cagcagagggagctagcggatctgtgttctctggtggagaccatgccgggaaccatcatg
gcgcaggtggagcacgttctgatgaagcaccaggagcaggaacagcgcagactggaccga
gctctggccgagaatcagagccgccagcaacagcttcacgagcagctgagccagcagctg
agccacgccctcagcacggcgctgaccaacaggatggacaaagtcctgagagaggaacta
aagaaagcagttccgcaaaccatttctaagagtctggagccggtgacggggcagctgaac
aactcgatcgccgctaagatggccgccgtggaggtcacgattaaggacatcgtcatcaaa
gtggttaaatccaagaacactacggacgccatgggccgggccgcggcggaggccatgcag
ggccccatccaggccgcctacaaagacgtcttccagagcacagtgctgcccgtgtttgaa
agaggctgccagtccatgttccagcagatcaacgacagcttcaagcagggcacgcaggac
tacatccagcagctggaggcccacctgaagagtcggaagcagagagagcaggaggcgcgg
gaccccgtgatcggccagctgcagcaggcgatcgacggcttccagagctgcaccgatcag
ctggccagcagcgtctctgccgccgtacgagccgaggtccagcaccagatgcaggtggtg
gtggggaatctgcaggactccatcctgagccagttgcagcgcatcgtgaaaggcgaggtg
agcctggcgatgagggagcagcaggccgtcgtcacctccagcatcatgcaggccatgcgc
tccgctgccgggacgcccgtccccaccgcacacctggactaccagtcgcagcaggctaac
atcctgcagctgctccagcagggccagctcaaccaggccttccagcaggtaccgactcga
cccagacaccacaggtcacactag
DBGET
integrated database retrieval system
