Poecilia latipinna (sailfin molly): 106949893
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Entry
106949893 CDS
T08005
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106949893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106949893
03041 Spliceosome [BR:
plai03041
]
106949893
03036 Chromosome and associated proteins [BR:
plai03036
]
106949893
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106949893
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106949893
mRNA cycle factors
Common to processing body (P body) and stress granule
106949893
Spliceosome [BR:
plai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106949893
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106949893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
106949893
NCBI-ProteinID:
XP_014891925
Ensembl:
ENSPLAG00000006604
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSHVAVENAHGLEQQLAVLDLSAPDGQGGGTNRRYIPPHLRNKDASKNVGNAFAAGRPGG
YTIAPAANYGWDAGRNNFVNGYHDNRMTGNSFNRGPPRMERGRGGVAGGSYRGNRGGAFN
PINPAQPINFEAGGWNTAKDAYSSFGNNRGKSAFFNDRGNTNRGRFDHGGFGGGGGGNSR
WVEESRDDGDWSKPLPRNERLEHELFSGSNTGINFEKYDDIPVEATGQNSPHHIESFQDV
DMGEIIMGNIALSRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPILSQIYTD
GPGEALNAAKASGQENGKYGRRKQYPIALVLAPTRELALQIYDEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQI
RRIVEQDTMPHKGIRQTLMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLSATVIPNEVQDNTGDNVEKPGKDSLTLVFVETKKGADALEDFLYRE
GYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEE
YVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSN
RGRSKRFSGGFGARDYRQTAAGGNAGGFGGRGGRNQQGHGGNRGFGGGGFGNFYTSDGYG
GNYSHSQVDWWGN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgcccacggtctagagcagcagctcgctgtcctagac
ttgagtgctccagatggacaaggcggaggtactaacaggcgatacattcctccacattta
cggaacaaagacgcatccaagaacgtgggaaatgcttttgctgctggacgaccggggggg
tacaccatagcgcctgcagcaaactacggttgggacgcagggcgcaacaactttgtcaac
ggctaccatgacaaccgcatgaccggcaactcgttcaaccgtggcccgccacgcatggag
cgtgggcgaggcggtgttgcgggaggcagttaccgtggcaacaggggcggggcgttcaac
cccattaaccccgcgcagcccataaacttcgaggccggtggctggaacacagccaaagac
gcctatagcagctttggcaacaaccgagggaagtctgcgttcttcaacgacagaggcaac
accaacagaggaaggttcgatcacggtggattcggtggtggcggaggaggaaacagccgc
tgggtggaggagtccagggacgatggcgactggtccaagccgctgccgcgtaacgaacgc
ctggaacatgagctgttctccggcagcaacaccgggatcaactttgagaaatacgacgac
attcccgttgaggctacaggacaaaactcccctcaccacatcgagagtttccaagatgtc
gacatgggtgagattatcatgggtaacattgctctgagccgctacaccagaccaactcct
gtgcagaaatacgccattcctatcgtgaaatccaagagagacctgatggcctgcgcacag
acgggatctggaaagacagctgcgttcctgcttccaattctcagccagatctacacagac
ggaccaggagaagctctgaacgcagccaaagcctcaggacaggaaaatgggaagtatggc
cggcgtaagcagtaccccatcgccctggtgctggccccaaccagagaactggcactgcag
atctacgacgaagccaggaagttttcgtaccgctccagagtgcgtccctgtgtggtgtac
ggcggggcagacattggccagcagattagagacctggagagaggctgccacctgctggtc
gcaacacctggcagactggtggacatgatggagagaggcaagattggactggactactgc
aactacttggtgctagatgaggcggaccgcatgctggacatgggctttgaaccacagata
agacgcatagtggagcaggacaccatgccgcacaaaggcatcagacagaccttgatgttc
agcgctacgtttccgaaagagatccagatcctggcgagggattttctggaggattacatc
ttcctggcagtgggcagagtgggttccacctcggagaacatcacacagaaggtggtgtgg
gttgaagagagcgataagagatctttcctcttggatctgctcagtgctacagtcatcccc
aacgaggtacaggacaatactggagacaacgtagagaaacctggtaaagactccctgacc
ctcgtcttcgtggagaccaagaaaggagccgacgccttggaggacttcctgtaccgggag
ggctacgcctgcaccagtatccatggcgaccgctcccagagagaccgcgaggaggcactg
aaccagttcagatcgggaaagtgccccatccttgtcgccacggcggttgcagctcgaggt
ctggacatctccaacgtgaaacatgttatcaacttcgaccttccaagcgacatagaggag
tacgtccaccgcatcggacgtacggggcgagtcggaaacctggggctggccacgtcattc
ttcaacgacaaaaacgggaacatcacaaaggacctgctggatatcctggtagaggctaaa
caggaggttccttcatggctggagagcctggcttatgaacaccagcacaagagtagcaac
agggggcgctctaagaggttctctggtggtttcggagctcgggattaccgccagacagct
gccgggggcaacgccggagggttcggggggcggggaggacgcaaccagcagggacacgga
ggaaaccgtggcttcggaggaggtggtttcggcaacttctacacaagcgacggctacgga
gggaattactcccactctcaagtggactggtggggcaactag
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integrated database retrieval system
