Poecilia latipinna (sailfin molly): 106950129 Help Entry 106950129         CDS       T08005                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism plai  Poecilia latipinna (sailfin molly) Pathway plai03440   Homologous recombination plai03450   Non-homologous end-joining plai04218   Cellular senescence Brite KEGG Orthology (KO) [BR:plai00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     106950129 (rad50)    03450 Non-homologous end-joining     106950129 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     106950129 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:plai03032]     106950129 (rad50)    03400 DNA repair and recombination proteins [BR:plai03400]     106950129 (rad50) DNA replication proteins [BR:plai03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     106950129 (rad50) DNA repair and recombination proteins [BR:plai03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      106950129 (rad50)     BRCA1-C complex      106950129 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      106950129 (rad50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ABC_tran zf-met AAA_29 AAA_13 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  106950129 NCBI-ProteinID:  XP_014892264 Ensembl:  ENSPLAG00000016411 UniProt:  A0A3B3VRW9 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQIISFFTPLTVLVGPNGAGKTTIIECLKYATSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRSMSCTQKAKNYSFKSLEQVITR IKDGERVSLSSKCGELDREMISALGVSKPVLNHVIFCHQEDSNWPLSEGKALKDKFDSIF AATKYIKALETMRQLRLKQSQTVKECQVELRYLKQNKEKAQQIRETVATKEAQLTASKDS VHQTESQIEPLENQLMEFDQKLGKVMKLDNDIKALDSRKKQMEEDNKELEETMEQVFQGS DEELQDIYQNHQRTVKEKERRLTDCQRELERAGRECQRLNRVKADLLVEQGRLQLEADRH TQNVKSRDTLVRSLSSHLEMEGYDRPPFTSLQLESFHRHVIQRLEQEKETLSQITADLQE KEQQKQQSIDEIRDKKTGLERTVELKRDMQGKKQQELRNIRADLQKLEGSSSRLQELENE LAKAECELERAVQSSNVEELKTEIEGLQREKTELDRAQRRLDQEMQILNTHTTARTQMDM LKKDKTEKEEQVRKTKARHGENLTSLLGHFPNKRELEDWIYSKSKEINSTRDKLAKLNKD LASSEQNKSHIATELRKKEQQLTSDEEKFFSVCGSQDLEQDLGRLQEDLEKVSKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK KKERKRDEMMALKPVRQAIVQFQEKELPELRNRLQIVNREIERLKAEIEEQDTLLGTLMS EEETAKACLQDISLMDRYLMDLKELDRKIAQQAAKLQGVDLTRTIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQILKSAVNETRAEKLQLSSDMQKQQQLEEQCVDFTAEIQA LTRDIREAKEQLSPLSAALEKLQQEKQELMEHKRKKQEEGQEKINGIKERVKSVSILERD IKKYMDDGREEYKEQKESELQETNTQLHEAEKQKDKINKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVVAKRETLMKDMGNMQVLQLRQERRDAERKLEDLKKNRSIALGRQKG FEEEILHYRKELREDQYDKAEERYKNKMITMRTTELVIKDLDLYYKALDQTIMRFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVKRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIENFYRIRKNQDQNSEINKCSISSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatagacaaaatgagcatcctcggagtgaggagctttgggattgaggataaa gacaaacaaataatttccttttttactcctttgactgttctggtgggacctaacggagca ggaaaaacgactattattgaatgcctcaagtatgcaacatcgggggaacttccccctgga tctaaaggaggagcttttgttcatgatccaaaggatgcccatgagacggatgtacgagct cagattcgactcctgttctcagacgttaatggagagaaagtcaccatccagcgctccatg tcctgcacacagaaagcaaagaactactcattcaaaagcttagagcaggtcattactaga ataaaagatggtgaaagagtaagtctttcttctaagtgtggtgaactggatcgggagatg atttctgctttaggagtttccaagccggtgctgaatcatgtcatcttttgtcaccaagaa gattccaactggccacttagtgagggcaaagcactcaaagacaaatttgactccatcttt gctgcaaccaaatatattaaggctctggagacaatgcgtcagctgcgcctcaaacagagt cagacagtcaaagaatgccaagtggagttacgctacctgaagcaaaacaaggagaaggct cagcagatcagagagactgtggccaccaaggaggctcagctgacggcctccaaagacagt gtccaccagacggagagccagattgagccgcttgagaatcaactgatggagttcgaccag aaactggggaaggtgatgaagttggacaatgacatcaaggctttggacagcaggaagaaa cagatggaggaagacaacaaagagctggaggaaaccatggaacaggtgtttcagggttca gatgaggagctacaagacatttaccagaaccaccagaggacagtgaaggagaaggagcgc aggttgacagactgccagagagagctggagagagccggccgggaatgtcagagactcaac agagtgaaggccgatctcttggtcgagcaaggtcgtcttcagctggaagctgatcgccat actcagaacgtcaagagccgtgacactctggttcgctctttgtcatcccatctggagatg gagggttatgaccgcccccccttcacctccctgcagcttgaaagctttcatcgtcacgtc atacaaagactggagcaggagaaagagacactcagtcagattacagcggatctgcaggaa aaggagcaacagaagcagcagtctatcgatgaaataagggataagaagactggcctggag agaactgtagagctgaagagggacatgcagggaaagaagcagcaggagctgaggaacatc agggcagatctgcagaaactcgaagggtcatctagtcgactgcaagagctggaaaatgaa ttggccaaagctgagtgtgagctggaacgtgctgttcagagctccaatgtcgaagagctg aagactgagattgagggactccagagagaaaagacggagcttgaccgggcgcagagacgg ctcgatcaagagatgcagattcttaacacgcacacaactgcacgcactcagatggacatg ttgaagaaagataagacagagaaggaagagcaggtacggaaaaccaaggctcgtcacggc gagaatctcacgtccctcctgggtcattttcccaacaagagagaactggaagactggatc tattccaaatccaaggaaatcaatagtacaagggacaagcttgccaaattaaataaagac ttggcgtcaagtgagcagaacaaaagccatattgctactgagttgcggaagaaggagcaa caactaacaagcgatgaagagaagttcttcagcgtgtgtggcagtcaggatctggagcag gatctgggcagactgcaggaagatctggagaaggtatccaagcaaagagccatgttagca ggagccacagcagtgtacactcagttcatcagccagctgacagaggagagggagccctgc tgccctgtgtgccagcgcacctttccttcagaatcggacctgcaggaagttatcagcgac atgcagtccaagctacgcctggtgcctgacaaactgaagaacacggagcaggacctgaag aagaaggagaggaagagggatgaaatgatggcactcaaacctgtgagacaggccattgta cagtttcaggagaaggagctgcctgagctgagaaaccgacttcagattgtgaacagagaa atcgagaggctcaaggctgaaatagaagaacaggacacgctgcttggtaccttaatgtct gaggaggaaacagccaaggcctgcctgcaagacatctctctgatggacagatacttgatg gaccttaaagagctggacagaaaaatagctcagcaagcagctaaactccagggagtagac ctgactagaaccattcagcaagttagtcaggagaaacaagagacgcagcacaagctggac accacctctagcaaaatggagctgaaacgtaagctgatccaagatcaacaggaccagatt cagatcctgaaaagtgccgttaatgaaacgagagcagagaagctgcagctaagcagcgac atgcagaaacagcagcagctggaggagcaatgtgttgactttactgcagagattcaggct ttaaccagagacattagggaagcaaaggaacagctgtcacctctgtctgctgctttggaa aagctgcaacaagagaagcaagaattaatggagcataaaagaaagaaacaggaagaaggc caagaaaagatcaatggcataaaagagagggtgaagtctgtctccattttggaacgagat attaaaaaatacatggatgacggaagagaggaatataaagagcaaaaggaatcagagctt caagaaaccaacacacagctccatgaggctgagaagcagaaagacaaaataaataaggag atgggaaacatccgtcaggacatagatacccaaaaggtccaagagcgctggttacaagac aatctgacattaaggaaacgagttgaggaactgaaggaggttgtagctaaacgagaaact cttatgaaagacatgggcaacatgcaggtgttgcagctgcgccaagaacgtcgtgatgca gaacgcaagttagaagatttgaagaagaaccggagcatcgcactaggtcggcagaaaggc ttcgaagaagagattctgcattacagaaaagagttgagagaagatcagtatgacaaagct gaggagcgctacaaaaacaagatgatcaccatgaggaccactgagttggtcattaaagac cttgatctctactacaaagcccttgatcaaaccatcatgaggttccacagtatgaagatg gatgagatcaataaaattatcagagacctgtggcgcagcacctacaggggtcaagatatt gagtatgtggagatcaggtcggatgtggatgagaattcatcagctggagttaagaggagg gtttacaactacagagtagttatggtgaaaggagacacggctctggatatgagaggacgc tgcagtgctggccagaaggtgttggcatccctgatcatccgtcttgccctggcagagact ttctgtctgaactgtgggatcttggccttggatgagcccaccaccaacctggacagagag aacatcgagtccttggcacatgcccttgtagaaatcatcaagagtcgttctcgtcagcgc aatttccagcttctcatcatcacccatgatgaagactttgtggagctcctgggccgctcc agctacatcgagaacttctaccgaatccgcaagaaccaggaccagaactctgaaatcaac aagtgcagcatctcctctctctcgtcttaccttcattaa

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