KEGG   Poecilia latipinna (sailfin molly): 106950136
Entry
106950136         CDS       T08005                                 
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106950136 (cdc40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plai03041]
    106950136 (cdc40)
Spliceosome [BR:plai03041]
 Complex C
  Other components
   Step II factors
    106950136 (cdc40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_Vps41
Other DBs
NCBI-GeneID: 106950136
NCBI-ProteinID: XP_014892269
Ensembl: ENSPLAG00000016278
UniProt: A0A3B3UWX9
LinkDB
Position
Unknown
AA seq 581 aa
MSAAIASLASYGSDSDSENESESNTSIKKVDPDDPDATAHLKPLQSGPTMSLAVLNSAPE
VAVKEAVETGIHLDPSLKEVTYNPTYETMFAPEFGPTNPYKSQQMSAPRNMLSGYAEPAH
VNDFMFEQQRRTFSTYGYALDPSVDTHEASSCSYIGAVEEAEKNKGLTVFESGQKKPEKR
KKVKGGDAGEIDSFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGRNEDEAPGEEK
TILHVKDMYDYQGRSYLHVPQDVGVNLRSADAPDKCYLPKKQIHVWSGHTKGVSAIRLYP
RSGHLLLSSSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNSGTQFLSAAYDRYLKL
WDSETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRTSEVVQEYDRHL
GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC
QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK
TTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgtctgccgccatagcttccctcgcttcgtacgggagcgattccgactccgaaaacgag
tcagaatctaataccagtatcaagaaagttgatccggatgatccggatgctacggctcac
cttaaacctctgcagtctggacccacaatgtctttagctgttcttaattctgccccggag
gtcgctgttaaggaggctgttgagactggcatacacttggacccttcactgaaagaagtc
acttataacccaacatatgaaacgatgtttgcccctgagtttgggccgacgaatccgtat
aagtcccagcagatgtcggccccaaggaacatgctgtctggctatgcagaacctgctcac
gtcaatgattttatgtttgaacagcaaaggaggactttctctacttatggttacgcttta
gatccttctgttgacacacacgaagcttcctcttgtagctatattggtgctgtggaagag
gctgaaaaaaacaaaggactgactgtctttgaaagtggtcagaagaagccagagaaacgg
aagaaggtcaaaggtggggacgcgggagagattgacagcttcctggggccgtgggcgaaa
tatgtggacgaaaaagatgtggccaaaccgtcagaggaagagcagaaagaactcgatgag
atcactgctaaaaggcagaagaagggaaggaatgaagacgaggctccaggagaagagaag
accattcttcacgtcaaagacatgtatgactaccagggcaggtcatacctccatgttcca
caggatgtgggcgtcaacttgcgctctgcagatgctccagataagtgttacctgccaaag
aaacagattcatgtctggtctggacacaccaagggtgtcagtgctatccgattatatccc
aggtctggtcatcttctgctctcctcttccatggactgcaagatcaagctgtgggaggtc
tacggagagaggaggtgtctccgtacatttattggtcacagcaaagcagtgcgagacatt
tgcttcaacaacagtgggactcagttcctcagtgctgcatacgaccgctaccttaaactg
tgggactctgagacaggccagtgtatctctcgcttcacaaacaggaaggtaccctactgc
gtcaagttcaatccggacgaggacaagcagaatctttttgtggccgggatgtcagataag
aagattgttcagtgggacatcaggacgagcgaggtggttcaggagtacgatcgccacctg
ggtgctgtgaacaccatcacctttgttgacgaaaatcgccgctttgtcagcacgtcagat
gataagagtctgcgagtctgggagtgggacatccctgtggacttcaagtacatcgctgag
cccagtatgcactccatgccagctgtgactctgtctcccaatggtaaatggctggcgtgc
cagtccatggacaaccagattcttatctttggagcccagaatcgcttcagactgaacaaa
aagaaaatcttcaagggtcacatggtggccggctacgcctgccaagtggatttctcccca
gacatgagctatgtggtatcgggggatgcagatggaaagctgaacatttgggactggaag
accaccaagctctatcacaggatcaaggctcacgacaaagtctgcatcagtgctctgtgg
catccgcacgaaacctcgaaggtcatcacctgcggctgggatggacagatcaaactctgg
gactaa

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