Poecilia latipinna (sailfin molly): 106950136
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Entry
106950136 CDS
T08005
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106950136 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106950136 (cdc40)
Spliceosome [BR:
plai03041
]
Complex C
Other components
Step II factors
106950136 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
106950136
NCBI-ProteinID:
XP_014892269
Ensembl:
ENSPLAG00000016278
UniProt:
A0A3B3UWX9
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MSAAIASLASYGSDSDSENESESNTSIKKVDPDDPDATAHLKPLQSGPTMSLAVLNSAPE
VAVKEAVETGIHLDPSLKEVTYNPTYETMFAPEFGPTNPYKSQQMSAPRNMLSGYAEPAH
VNDFMFEQQRRTFSTYGYALDPSVDTHEASSCSYIGAVEEAEKNKGLTVFESGQKKPEKR
KKVKGGDAGEIDSFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGRNEDEAPGEEK
TILHVKDMYDYQGRSYLHVPQDVGVNLRSADAPDKCYLPKKQIHVWSGHTKGVSAIRLYP
RSGHLLLSSSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNSGTQFLSAAYDRYLKL
WDSETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRTSEVVQEYDRHL
GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC
QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK
TTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccatagcttccctcgcttcgtacgggagcgattccgactccgaaaacgag
tcagaatctaataccagtatcaagaaagttgatccggatgatccggatgctacggctcac
cttaaacctctgcagtctggacccacaatgtctttagctgttcttaattctgccccggag
gtcgctgttaaggaggctgttgagactggcatacacttggacccttcactgaaagaagtc
acttataacccaacatatgaaacgatgtttgcccctgagtttgggccgacgaatccgtat
aagtcccagcagatgtcggccccaaggaacatgctgtctggctatgcagaacctgctcac
gtcaatgattttatgtttgaacagcaaaggaggactttctctacttatggttacgcttta
gatccttctgttgacacacacgaagcttcctcttgtagctatattggtgctgtggaagag
gctgaaaaaaacaaaggactgactgtctttgaaagtggtcagaagaagccagagaaacgg
aagaaggtcaaaggtggggacgcgggagagattgacagcttcctggggccgtgggcgaaa
tatgtggacgaaaaagatgtggccaaaccgtcagaggaagagcagaaagaactcgatgag
atcactgctaaaaggcagaagaagggaaggaatgaagacgaggctccaggagaagagaag
accattcttcacgtcaaagacatgtatgactaccagggcaggtcatacctccatgttcca
caggatgtgggcgtcaacttgcgctctgcagatgctccagataagtgttacctgccaaag
aaacagattcatgtctggtctggacacaccaagggtgtcagtgctatccgattatatccc
aggtctggtcatcttctgctctcctcttccatggactgcaagatcaagctgtgggaggtc
tacggagagaggaggtgtctccgtacatttattggtcacagcaaagcagtgcgagacatt
tgcttcaacaacagtgggactcagttcctcagtgctgcatacgaccgctaccttaaactg
tgggactctgagacaggccagtgtatctctcgcttcacaaacaggaaggtaccctactgc
gtcaagttcaatccggacgaggacaagcagaatctttttgtggccgggatgtcagataag
aagattgttcagtgggacatcaggacgagcgaggtggttcaggagtacgatcgccacctg
ggtgctgtgaacaccatcacctttgttgacgaaaatcgccgctttgtcagcacgtcagat
gataagagtctgcgagtctgggagtgggacatccctgtggacttcaagtacatcgctgag
cccagtatgcactccatgccagctgtgactctgtctcccaatggtaaatggctggcgtgc
cagtccatggacaaccagattcttatctttggagcccagaatcgcttcagactgaacaaa
aagaaaatcttcaagggtcacatggtggccggctacgcctgccaagtggatttctcccca
gacatgagctatgtggtatcgggggatgcagatggaaagctgaacatttgggactggaag
accaccaagctctatcacaggatcaaggctcacgacaaagtctgcatcagtgctctgtgg
catccgcacgaaacctcgaaggtcatcacctgcggctgggatggacagatcaaactctgg
gactaa
DBGET
integrated database retrieval system