Poecilia latipinna (sailfin molly): 106950206
Help
Entry
106950206 CDS
T08005
Symbol
dhx16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106950206 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106950206 (dhx16)
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106950206 (dhx16)
Spliceosome [BR:
plai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106950206 (dhx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
PWI
Flavi_DEAD
Cas3-like_C_2
nSTAND3
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
106950206
NCBI-ProteinID:
XP_014892384
Ensembl:
ENSPLAG00000014305
UniProt:
A0A3B3UF25
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MAQLEQWVNDRLHDILGLSDRYVSQFMIGIARKASSPEDLVSRLEQTGTIDIDQSVSAFA
KELFEKIPRQQVVEKPSKALERQAIEMDRKNRTYTLLEDSDSGEEVAADKQRGKKKKDKD
KGSKRKNIRQKKASESSSDDEKLKRGGSVLEDHRSVKKEEEEEEEWEKEERERLLDIEER
DAFAQRVRQKDKEKTRNIAERTDKKAYEEAQKRLKMAEDDQRNMLPELRKRSRWEYLKKR
EEEKLEDLEAEIIDEEYLFSKEELTERERRELEYKRTLRDLAKDYKQAGAKEQEERKNRY
YMPEERRSKDVPQRDLELDEAPMELGGEQGRWEEERLKTASLSFGARKERELGLKLEQDR
YQLVLEEEEMIDFVSTAITMKGTRSDKDEAEPALSQAELKKHSMQEVRRSLPIFPYREDL
LAAITEHQILVIEGETGSGKTTQIPQYLLEDGYTKGGMKIGCTQPRRVAAMSVAARVAEE
MSVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLH
TDILFGLIKDIARFRPDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIFYTKAPE
ADYLDACVVSVLQIHVTQPPGDILVFLTGQEEIEACCEMLQERCRRLGSKIAELVVLPIY
ANLPSDMQAKIFSPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMES
LIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTIPEIQRTNLGNVVLLLK
SLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMI
LASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQW
VESGFSTQWCYENFIQFRSMRRARDVRDQLEGLMERIEVEVVSCSGDNVPIRKAVTAGYF
YHTARLSKGGYRTVKHQQTVFVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIDSGWL
LEVAPHYYKSKELEDSSSKKMPRKQGKAREELG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctggagcagtgggtgaacgaccgtctccatgacatcctcggcttgagcgac
agatacgtctcccagttcatgattggcatcgctcgcaaagcgtccagcccggaggacctg
gtgagccgcctggagcagacgggaacaatcgacatcgaccagagcgtctctgccttcgca
aaggaactgtttgaaaaaattccccgtcagcaggttgttgagaagccgtccaaagccctg
gagcgccaggccatagagatggaccggaagaaccggacctacacgctgctggaggacagc
gacagcggcgaagaggtggcggctgacaaacagagaggcaagaagaagaaagacaaggac
aaaggaagcaagaggaagaacatcagacaaaagaaagccagcgagtcgtcgagcgacgat
gaaaagctgaagaggggcggttctgtcttggaggaccacagatctgtgaagaaagaagaa
gaagaagaagaggagtgggagaaggaggagagggagcgactgctggacatcgaggagaga
gacgccttcgctcagagagtcaggcagaaagacaaagaaaagacgcggaacatcgctgag
cggacggataaaaaggcctatgaagaagctcagaaacgactgaagatggctgaagacgat
cagaggaacatgttgccggagctgaggaagcgttcccgttgggaatatctgaagaaaaga
gaggaggagaagctggaggacctggaggcggagatcatagacgaggagtatctgttctcc
aaggaggagctgacggagcgcgagaggcgggagctggagtacaagcggaccctccgggat
ctggccaaggactacaagcaggctggggccaaggagcaggaggagaggaagaaccgctac
tacatgcctgaggagaggaggagcaaggacgtcccccagagggatctggagctggacgag
gcccccatggagctcgggggggagcagggccgctgggaggaggagcggctgaagacggcc
tccctcagcttcggagccaggaaggagcgcgagctgggcctgaagctggagcaggaccgg
taccagctggttctggaggaggaggagatgatcgactttgtcagcacggccatcaccatg
aaggggacgcgctccgacaaggacgaggcggagccggcgctgtcgcaggccgagctgaag
aagcactccatgcaggaggtgcgccgcagcctgcccatcttcccctacagggaggacctg
ctggccgccatcactgagcaccagatcctggtcatagagggggagacgggctccgggaag
accacccagatcccacagtacctgctggaggacggctacaccaaaggagggatgaagatc
ggctgcacgcagccccgccgggtggcggccatgtctgtggcggctcgcgttgccgaggag
atgagcgtgaagctgggtaacgaggtggggtacagcatccgcttcgaggactgcacgtct
gaacgcaccgtgctgaagtacatgacggacgggatgctgctccgagagttcctgactgaa
cccgacctggccagctacagtgtgatcatcatcgatgaggcccacgagcgaacgctccac
accgacatcctgttcggcctcatcaaagacatcgctcggttccgacccgacctgaaggtt
ctggtggccagcgccacgctggacacggagcgattttcctgcttcttcgacgacgctccg
gtgttcaggattcctggcaggagattccctgtcgacattttctacactaaagctccggag
gcggattacctggatgcttgtgtggtttcagtgctgcagattcacgtcacccagcctcct
ggagacatcctggtcttcctcaccggacaggaggagatcgaagcgtgctgcgagatgctg
caggagagatgcaggcgtctggggtcaaagatcgctgagctggtcgtcctgcccatctac
gccaacctgccgtccgacatgcaggccaagatcttcagcccgactcctcctggagcccgg
aaggtggtggtggccaccaacatcgcagaaacgtctctgaccatagacggcatcatctac
gtcatcgaccccggcttctgcaaacagaagagctacaacgcgcgcacgggcatggagtcg
ctcattgtcacgccttgctccagggcttcagccaatcagagagcagggcgggcgggcaga
gtggctgctgggaaatgtttccgcctctacacagcctgggccttcaaacacgagatggag
gagacgacgatccctgagatccagaggaccaacctgggcaacgtggtgctgctgctcaag
agtttaggaatcaacgacctgattcactttgacttcatggacccgcccccccatgagacc
ctggtgctggctctggagcagctgtacgcgctgggagccctcaaccacctgggggagctc
accaagctgggtcgcagaatggccgagttaccagtggatcccatgctgagtaaaatgatc
ctggcctcagagcagtacaagtgttcagaggaagtgctgaccatcgccgccatgctgtcg
gtgaacaactccatcttctaccggcccaaagacaaggtggtgcacgccgacaacgccagg
atgaacttcgtggttccgggcggagaccacctggtgctgctcaacgtctacacacagtgg
gtggagagcggcttctccacccagtggtgctacgagaacttcatccagttccgctccatg
aggcgagcccgggacgtccgggaccagctggagggtctgatggagcgcatcgaggtggag
gtggtcagctgcagcggggacaacgtccccatccgtaaggcggtgacggctgggtacttc
taccacacggcgcggctcagtaagggcggctaccggacggtgaagcaccagcagacggtg
ttcgtccatcccaacagctcgctgttcgaggagcagccgcgctggctcatctaccacgaa
ctcgtcttcaccaccaaggagttcatgagacaggtgatagagatcgacagcggctggctg
ctggaggtggcgcctcactactacaagagcaaagagctggaggacagcagcagcaagaag
atgccccggaagcagggcaaggcccgggaggagctgggctga
DBGET
integrated database retrieval system
