Poecilia latipinna (sailfin molly): 106950685
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Entry
106950685 CDS
T08005
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106950685
03036 Chromosome and associated proteins [BR:
plai03036
]
106950685
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106950685
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106950685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
106950685
NCBI-ProteinID:
XP_014893182
Ensembl:
ENSPLAG00000001008
LinkDB
All DBs
Position
Unknown
AA seq
2012 aa
AA seq
DB search
MCAFLVRRQENQEGEQQFMEDKKKKKEEKKKRETSQKVPEQKIKVPEPAKPSCSQPLATP
GSASPSPGPVSPSSPSPGAGGGSAQVPPGGGNNAKQRTAVANGQPSSASSPSGSQSSQQQ
QRYMSREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGESSTGGVGGGSGWDVAPSLQGAE
SPNANADGNTDSNVGSSSPSPPTSSSFCVAALSSSTTTSTYANSTWGAGSGGQSSSQGCG
KVFMDGTDLDDWPSITAGPKLISEGAGGGMQEQDCPGNNNSSASWGERNMQQKGGTAGGV
RGGEGNMDNLSPPRSSPLSSSSSPIECAQPSGVWVSSAASQVEVDQGSAASYNSKVSHLL
PGPQESPLGGSSNVPGANFNPNVNPSAWPALGQSGTSVPACSASSQHSSVTSASSFSAST
TVITTQTLSSVNQTGLYQQHTETAVGAKTGEQQQQHLGNPGPEPCSGGAGREAGPNQEGV
NEGNSEVGGEGEANTSGSLSSSSAASSSWSAMPPVTSEPGAGASQADGWGGGGTGAQGHE
GNVWRFGSQDDKAGWGKGNGGGSTNPVVSQGAWEGGSTEVNWGGTAESVGSINLAIGSGG
EVDGSSISSSTDSGGGGCLEDSASQNLATMTKAWDNQKGMEGGDGTVGEWGGPGEPGGAV
GGGGGHSSSSGGGSVAGSGGGQKERSARHHSDHSSGADVALLSMLNRSDLDPRVLSNTGW
GQTQIKQNVAWDLDTSKGVGNRNERNPSSSSAFSSATINTTTIRSSRYPSESGSASNDVS
SGSLNSGPATPRDNWEGGATQSTGGPFMPSSTMRKPGSPEDDIQGGQGKAAGGWGEPPPD
KEGKGWRTDDQQWGGHRGGRKNWQDFEQQGSGWGDGAEDKGTGGWKGSTRGETGGWGEEW
GKRDSASGAGWGDGRSRVGSNSDEGSSWGNVDEGGSQRGGWGSGGDVGGGKSHQDWGGAK
PNAAQIPNSQAAPTKAQNHHHHHQQQQQSPGGWNSQPSVGGGAQLSKNQNQSLGWTSGPI
PQISGGTGDPLEPSGWEEPSPQSISRKMEIDDGTSAWGDPTRYNNKNVNLWDKNSTAPGS
NQGPQGPPPPAMQQQPPRRQHSINSNPGSGAVGMWGGAAQSVDDGTAAWGQASDAATGWG
EPDDSSKSSGWRNPSPNPSKPGVKSVDSWGGKGDGPIAASRHPSWEDDEDGGGGGGVWNS
AGSQGSGSSFNSGGWGQSHPGKRGNIKSGGGDSWMNPVSRQFSNMGLLGDDPGVDKKMDG
DKRGINDYNGEMRRGGRSGGGYRMPSSKDMGPGDMGPYGDKMGGHGVFVAGGGGMSQPRG
MHQPGMHSMNASPGLRAQVPHQFLSAQVPGPMLKQMPSPGGSVGGVGGVGGVGGVGGGVF
PPQISPQQLAVLSNIYPHMQQFHLACQLLIQQQQQQQQQQLLQNQRKFPQPQPLRQQTDP
QQLARIMAILQQRQQQQVGVGGATPGGGNSKLSPSHLGGGVSKQSMVDPLPHTGMGGPLS
DLHAKSQGMYSGLTAGGNLSTLELSPMMGGMKDMSGQQSRFKWMMEGHSPAPSPPDTALH
KNGPIPSTIKVRGGSPYSQYEMLGSEGLGIPPQGSADSWHRTPGSKMGNKPATSSWPPEF
QPGVPWKGIQSTGDPESDPYMTPGRVLGSPASPNLNDPDHPLLRDNIGPNPSLNTSLPSP
GAWPYSASDSPLSNAHSTGKYSEYKPSWPPEPIGQNKLWKTNRNSSQLPRPPPGLTNQKQ
ASPSPWGTGGPRLARSWGGMNQESRFGSGSAWSDGTSRSSCWLLLRNLTPQIDGSTLRTI
CMQHGPLLTFHLGLTQGSALVRYNSRQEAAKAQGALHMCVLGNTTILAEFVSEEEVARYF
AHSQAEGAGSGGAAGNGAPGSSGTGAAVASSGGSSPGSERPAVGSSSGGNGGGGERSSGS
GWQSLDGTGASSEASSAQGPGLAIFSQWSTNGAGEGGVGGVESGRSGLWGGINAGYPSSS
LWGAPQMEERHQMDGSAGLLPGDLLGGGADSI
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcatttcttgttcgcaggcaggagaatcaagaaggggaacagcagttcatggaa
gacaagaaaaagaagaaagaagagaaaaagaaaagggaaacctctcagaaggtgccagaa
cagaaaatcaaagtgccagaaccagccaagccctcctgttcccagccgctcgccacccca
ggctcagcgtcccccagccctggccccgtttccccgtcgtcccccagtcctggtgcaggt
gggggttccgcccaagtccctcctggtggcgggaacaatgcaaagcagcgaactgctgtg
gccaacggacagccctcctccgcctcgtctccttctggaagtcagagttcgcagcagcag
cagcgatacatgtctagagaagtcccaccgcgatttcgctgccagcaggaccataaagtg
ctactgaagaggggccagccgccgctgtcctccatgctgttggggggaggggaaagcagt
acgggaggggtgggaggaggcagtggctgggatgttgccccgtccttacagggggcagaa
agccccaatgcaaacgccgacggaaatacagattccaacgtgggttcatcctccccttca
ccccccacctcatcctcattttgtgttgctgctctgtcgtcttctactactacttcaact
tatgcaaattccacatggggggccggctccggcggccagtcctcctctcagggctgcggg
aaggtgtttatggatgggactgacctggatgactggcctagcatcactgctggccccaaa
ctgatttctgaaggggctggaggagggatgcaggagcaggactgccctggtaacaacaac
agtagtgcctcatggggggagagaaacatgcagcagaagggaggaactgcaggaggagta
cgaggaggagaagggaacatggacaatctttccccacctcgctcttctcctctttcttct
tcttcctcgcctattgaatgtgctcagccaagtggtgtgtgggtctcctccgccgcgtcc
caagtggaggtagaccaaggctcggcagcatcttacaattccaaagtctcccatcttctt
cctgggcctcaggagagcccgttgggtggcagcagcaacgtccctggtgccaatttcaac
cctaatgtgaacccgtctgcctggcccgccctggggcagagcgggacctccgttccggct
tgtagcgcctcatcgcaacactcgtccgtgacttcagcttcctcattctctgccagcacc
actgtcatcaccactcagacactttcatctgtgaatcaaactggtctctaccagcagcac
actgaaaccgctgtgggggccaagactggagaacagcagcagcagcacttaggaaatcca
gggccagagccgtgttcgggcggggcggggagagaagcgggaccaaatcaggaaggcgtc
aacgagggaaactctgaggttggcggtgaaggtgaggcgaatacttctgggtctctgtct
tcctcctctgctgcctcgtcatcttggagcgccatgcctccggtgacctccgaacctggc
gctggtgcctcgcaggcggacgggtggggcggagggggtacaggagctcaggggcacgaa
gggaacgtttggaggtttggtagccaggacgacaaagccgggtggggcaaggggaatggc
ggggggtcaaccaacccagttgtatctcagggagcttgggaaggaggaagtacagaagtg
aattggggcggcaccgcagaaagtgtaggttctattaacttagcaataggaagtggagga
gaagtggatggaagcagcatcagcagcagcacggacagcggcggcggcggctgtttagag
gactctgcctcgcaaaacttagcaactatgacaaaagcttgggacaatcagaaagggatg
gaaggtggagacgggacagtcggggagtggggaggcccaggagagccgggtggagctgtc
ggaggcggtgggggacattcgtcgtcgagcggcggtggatctgtcgctggaagcggaggc
ggacagaaggagcgctccgcgcggcaccattccgaccattcctccggggcagacgtggcc
ttacttagcatgctcaacagatccgacctggacccccgagttctgtccaacacgggctgg
ggccagactcagatcaagcagaacgtggcctgggacctggacacctcaaaaggtgtaggg
aacagaaacgaaagaaacccttcatcttcctctgcattctcatcagcaaccataaacact
accaccatccgcagctccaggtacccctccgagagcggttctgcgtccaatgatgtgtca
tccggcagcctaaactctggccccgctacgcccagggacaattgggagggtggcgctacg
cagtctactggtggtccttttatgcctagcagcaccatgaggaagccaggatcgccggaa
gacgacatccagggcggtcaaggaaaggcagctggaggatggggggaacccccacctgac
aaagagggcaaaggatggaggacggacgaccagcagtggggaggtcacagaggaggaagg
aaaaactggcaagactttgaacaacagggtagcgggtggggagacggagcagaagacaaa
ggaacaggggggtggaaaggatctacaagaggagaaacgggtggttggggagaggaatgg
ggcaagagagactcggcttctggggccgggtggggagacgggaggagtagagtcggaagc
aactccgatgagggatcctcctggggaaacgtggacgaagggggatctcagcgaggaggg
tggggcagtggaggagatgtgggtggaggcaaatcccaccaggactgggggggcgccaaa
cccaacgcagcacagataccaaacagccaagcggcaccaacgaaagcccaaaatcatcat
catcatcatcaacagcagcagcaatcaccgggggggtggaacagccagccgagcgtcgga
ggcggagctcaactttcaaagaaccagaaccaaagtttggggtggacctctggcccgatt
cctcaaatctccggaggcacgggggacccgctggagcccagcggctgggaggaaccgtca
cctcagtccataagccggaagatggagatcgacgacggcacgtcagcctggggggaccca
acgcgctacaacaacaagaatgtgaacctgtgggacaagaacagcaccgcgccggggtcg
aatcaaggcccacagggtccgccgccgccagcgatgcaacagcagcctccgagacggcag
cacagcatcaactccaaccccggcagtggagcagtgggcatgtggggtggagctgcacaa
agcgtggatgatggtacagcggcttggggccaggcgtcggacgctgcgaccggctgggga
gaaccggacgattccagcaaatcatctggctggaggaacccttcacccaaccccagcaaa
cctggagtgaagtcggtggacagctggggcgggaagggcgatggccccatcgctgcgtcc
cggcacccgagctgggaggatgacgaggatggcggcggcggcggcggagtgtggaacagc
gcgggttctcagggaagcggctcgtcatttaactctggaggctggggacagagccaccct
gggaagagaggaaacatcaagagtggaggaggcgacagctggatgaatccagtatcacgc
cagttttccaacatgggtcttctgggtgatgatcctggggtggataaaaagatggacggg
gacaagagaggaataaatgactacaatggagagatgcgaagaggaggacgaagcggagga
gggtaccgcatgcctagttccaaagacatgggccctggtgacatgggaccctacggtgat
aagatgggtggccatggagtgtttgttgcaggtggaggagggatgtctcagcctcgaggg
atgcaccagcctggcatgcattcgatgaacgcgtccccagggttacgggctcaagtgcct
catcagttcctgtctgctcaggtgccgggtcccatgctgaagcagatgccctctcctggt
ggcagcgtagggggagtgggaggtgtcggcggggtcggtggtgtcggtggaggagtgttc
ccgcctcagatttccccgcagcagcttgcagtgctcagcaacatttacccccacatgcag
cagttccatctggcttgtcagctgctgatacagcagcagcagcagcaacagcaacagcag
ctcctgcagaaccagaggaagttcccccaacctcagcctctcaggcagcagacagacccg
cagcagctggcgaggatcatggcgattctccagcagaggcagcagcagcaggttggagtt
ggaggagcaacacctggaggagggaactccaagctgtccccctctcacctgggaggaggc
gtatccaaacaatccatggtagaccccctcccacacactgggatggggggtcccttatca
gatcttcatgccaaatcacaaggaatgtattctgggctcacagctggtggcaacctgtcg
acactagaactcagtcccatgatggggggcatgaaggacatgagtggacaacagtcccgc
tttaaatggatgatggagggacattcccctgctccgtctcctccagacacagcccttcac
aagaatggccctatacccagtacgataaaggttcgaggagggtctccgtactcccagtat
gaaatgctgggcagtgaaggtttagggatcccacctcagggctctgcagacagctggcac
cgaactcctggtagtaagatgggaaacaaacctgccacttcaagctggcctccagagttc
cagcccggtgtgccatggaaaggaatccagagcactggggacccagagtctgacccctac
atgacccctggcagagtcctcggctcccctgcatccccaaatctcaatgatccggaccac
ccattactacgagacaacatagggccaaacccctccctcaacacctcgctgccttcacct
ggtgcctggccctacagtgcctcagacagccccctcagcaatgcacacagcacaggaaag
tactctgagtacaagcccagctggcctccagagcccatcggacaaaacaaattatggaag
accaatcgcaatagctcgcagctgccgcgtccccctcctggcctgaccaatcagaagcag
gcctcgccctccccgtggggaactggaggtccgcggttggctcggagctggggagggatg
aatcaagagtcaagatttgggtcaggctcagcttggagtgatggtacctctagaagcagc
tgctggctgctgctgagaaacctgacccctcagattgacggctccacgctgaggactatc
tgtatgcagcacggccccctgctgacctttcacctgggcctaacccagggcagcgctctg
gttcgatataacagccggcaggaggcggccaaggctcagggtgctcttcacatgtgtgtt
ctgggaaacaccaccatcctggctgagtttgtgagtgaagaagaggttgcacgctatttt
gcacattcccaggccgaaggggccggctcgggaggagcggcgggcaacggcgcgcccggt
tcatccggaacgggcgcggccgtggccagcagcggcgggagctcccctgggagtgagcga
ccggcggtgggttcgtcttcaggcggaaacggcggcggaggggaaaggtcgtccggctcc
gggtggcagagtctcgacggtacaggcgcgtcttcggaagcgtcttcggcccaaggaccg
gggctcgcgatattctcccagtggagcaccaacggggccggggaaggaggcgtcggcggg
gtggagagcgggcggtctgggctgtggggcggcataaacgcaggatacccgagcagcagc
ctgtggggagcgcctcaaatggaggaaaggcaccaaatggacggctccgccggactgttg
cctggcgacctgctggggggaggggccgactccatctga
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