Poecilia latipinna (sailfin molly): 106950832
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Entry
106950832 CDS
T08005
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106950832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106950832
03009 Ribosome biogenesis [BR:
plai03009
]
106950832
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106950832
Spliceosome [BR:
plai03041
]
Complex A
U1 snRNP components
U1 related factors
106950832
Complex B
106950832
Ribosome biogenesis [BR:
plai03009
]
Eukaryotic type
Pre-60S particles
Helicases
106950832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
106950832
NCBI-ProteinID:
XP_014893429
Ensembl:
ENSPLAG00000013054
UniProt:
A0A3B3UA09
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKRHWNLDELPKFQK
NFYQEHPDATHRPLQEVEEYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNFTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTIAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVTAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDLEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRFGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYRDDRRDRYSGGRSNFGGGGGYRDRDGDRGFGNGPKTAFGGSKAQNGG
NYGGNNSNSSGNYGNSNYSNSNGQGNFSAPPNQGGGAGGFGNQNFQGPPQFGGMQRPAQN
GVNHPPFPFNSQPPPQNQQPPPPPPMVPYPMPPPFPQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttttcagacagagaccggggcagagatagagggtatggtggcggccctcct
cgtttcggtggcggtggaggaggcaacaggggaggacctcctcccggaaagtttggaaac
cccggagaacggctgaggaagagacactggaacctggatgagcttccaaagtttcagaag
aacttctaccaggaacacccggacgccacacacagacctctgcaagaggttgaagagtat
cggagaagcaaagaagtcacagtgaaaggcagagattgtcccaaaccaattgttaaattc
catgaagctgcttttccaagctacgtcatggatgttattgttaagcagaacttcactgaa
ccgactccaatccagtcccagggctggccagtcgctctgagcggcaaagacatggtgggc
atcgctcaaaccggctctgggaaaaccattgcttatcttctgccagcgattgttcacatc
caacatcagccgttcctggagcacggagacggacccatttgcttggttctggcgccgacc
cgggagctggctcagcaggtgcaacaagtgactgctgaatatgggagggcttctcgtctc
aagagtacctgcatctacggtggcgcgcctaaagggccacagataagggacctggagagg
ggagtggagatttgcatcgctactccaggccgtctcatcgattttctggagtgtggtaaa
accaatctgcgtcgttgcacctaccttgtgctggatgaagctgaccgcatgctggacatg
ggctttgaaccgcagatccgcaaaatagtggaacaaattcggcctgatcgtcagactctg
atgtggagcgccacctggcccaaagaggttcgtcagctggctgaggacttcctgaaggat
tacgtccagatcaatattggtgcattgcagctcagtgccaatcataacatcctgcagata
gttgatgtctgcaatgacctggaaaaggaggacaagctgatccgtttgttggaggagata
atgagcgaaaaggagaacaagaccattatctttgtggagaccaaaagacgttgtgatgaa
cttaccaggagaatgagaagagatgggtggccagcaatgggtatccatggagacaagagt
cagcaagagagggactgggttcttaatgagttcagatttggcaaagctccaattctgatt
gctacagacgtggcctcccgtggtttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggactatatccaccgcattggccgcacggcccgcagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggccagcgacctg
atctctgtgctgcgcgaggctaaccaggccatcaatcccaagctcatccagatggcagag
gacagaggaggtcgcggacgggggggaagaggtggctacagggatgaccgtcgcgatagg
tattcaggcggcagaagtaacttcggtggcggcggcggctacagggacagggacggcgat
agagggttcggcaacgggccgaaaaccgcctttgggggaagcaaagcccaaaacggtggg
aattatggaggcaacaatagcaattctagcggtaactatggcaacagcaattacagcaat
agtaacggacaaggtaactttagcgcgccaccaaaccaaggcggcggcgctggcggcttc
ggtaaccagaacttccaaggcccccctcagtttggcggcatgcagaggcccgctcagaac
ggcgtgaaccacccgccgttccccttcaactctcagccgccgccacagaaccaacagccg
ccgccaccgccaccaatggtgccctacccgatgccaccgccattccctcagtaa
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