Poecilia latipinna (sailfin molly): 106951357
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Entry
106951357 CDS
T08005
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106951357 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plai04515
]
106951357 (robo1)
Cell adhesion molecules [BR:
plai04515
]
Immunoglobulin superfamily
ROBO family
106951357 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
106951357
NCBI-ProteinID:
XP_014894306
Ensembl:
ENSPLAG00000022720
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MFVFGYQRLALQKGTLVLLSMFAVCLDGNRGLEVWASGVESGQNASSFSVPVVLLLTETG
VAQDGAGEGATAAPASETEDDNSLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCK
AEGRPAPTVEWYKDGERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVAR
NYLGEAVSHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGVN
IDDRDERITIRGGKLMITNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPSS
TVVLVDQSVEFKCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRVISADVGSYTC
VAENMVGKAEASATLTVHVVSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQRE
GSQNLLFSYQPPQPSSRFSVSQTGDLTITDAERSDMGYYSCQALNIAGSVITKALLEVTD
VVSDRPPPVIRQGPTNQTVAVDGTVVLSCVTSGNPIPTILWRKDGVLVSTHDSRVKQLDT
GALQIRYAKLGDTGTYTCIASTPSGEASWKAYLEVQEFGSPVQPNRPTDPNLIPSAPSKP
EVTDVSRTSITLSWKPNLNSGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPS
AVYLFLVRAANAYGLSDPSSISDAVKTQDIPPTSQGVDHRQIQRELADVVIHLHNPTILS
SSSVRVQWTVEQQSQYVQGYKVMYRPEGQQRSEWAVFEVRTPGEDSVIVTQLRKGVTYEF
KVRPFFNEFQGTDSDVKAGKTLDEAPSAPPRKVTVTESGSNGTAVVVSWQPPPEEEQNGV
VQEYKIWCLGNESKYHINRTVDGSTLSVVIPSLTPGIRYSVEVAASTSAGPGVKSETTFF
QFDSSGRMTETVNQENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGL
SSSYAGIRKVPSFTFTPTVAYQRGGESVSSAGRPGLLNMGDSATQPWLADTWPNSCSNHN
DCSINCCTAGNGNSDSNLATYSRPADCIANYNSQMDNKQTNLMVPESGVYGDVDLSNKIN
EMKTFNSPNLKDGRFVGPGGQPTPYATTQLIQSAIMGNNMNSDRGTGGSGGGLGGGGEVN
EKHCWKPPSIQQKQEMGSQLQYNILEQNKLNKDRYRGGDSPMPATIPYNQTHDTHTGGSY
NSSDRGSSSTSAGSQGHKRGVRTPKLPKQSTMNWADLLPPPPANPAPMCNTEEYSFSMEE
SCDPDMQCPMPQSHMYLQPDELEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQ
EEMQPMLQDVPDSHERRRHGVSPPPPPRPLSPSHTYGYISSPLALDTDGLDDEDILEEEE
EDGDETDAEVAKMHYHHTHPHTHSHHPQMHARRLLLRGLEQTPASSMGDLESSVTGSMIN
GWGSASEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNPQGQEVGG
ASARKYQINQLGHRPGSPVSTDSNMSMAAIHRRPPKKQKQHPAGHPGSQRREAFNEDLPP
PPIPPPAVLKSPTHPSKAALEGRGVISPKAGEGRDKRGGGYRPQEGSDPRTSSSERKDAQ
DRQKAAHGGKGNKSESSTANKARQNTEDVLPYSRPQFPTVNSTRDPSSSSSMSSRGSGGR
RRGEGARRNPGDLVVNNSVAFHQAEEELEMLES
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtttggataccagagactggctttacaaaaagggaccctggtacttctgagc
atgtttgctgtctgtctcgatggaaacagaggactagaggtttgggcctcgggtgtggag
agtgggcagaatgcgtccagtttttcagtccctgtggtgttattgttgacagagactgga
gtcgctcaggacggtgccggcgaaggggcaacagcagctcctgcctccgaaactgaggac
gacaactctttgggctacacaggatctcggctgcgccaagaggacaccccacctaggatt
gtagagcacccatctgacctgatcgtatccaaaggggagcctgccacactcaactgtaag
gcggagggacggccagctccaacggtggagtggtacaaagatggtgagcgggtggaaaca
gacagggacaatccccgctcccaacgcatgctgctgcccagtggctcccttttcttcctg
cgcatcgtccacggacgacggagcaaaccggacgaaggttcctacgtctgcgttgcccgc
aactacctgggagaggcagtgagccacaatgcctcgctggaagtagcaattctacgagac
gacttcaggcaaaaccctgcagatgtgattgtagcagctggagagccggctgtcctggag
tgccagcctccacgcggtcaccctgaacccaccatatcatggaaaaaagacggagtcaat
attgatgacagagatgagaggatcactatacgtggaggcaagctgatgatcacgaatgcc
cgcaagagtgacgctgggaagtatgtatgcgtcggcacaaatatggtcggagagcgtgaa
agtgaaatagctgaactgacagttctggagcgtcctagctttgtgcgtcgcccaagcagc
acggtggtcttagtggaccaaagtgtggagtttaagtgcgaggctcgtggtgacccagtt
cccactgtacgctggaggaaagacgatggcgacctccctaaaggacgatacgagatccgt
gaggaccacaccctgaagatccgccgcgtgatctccgctgacgtaggctcctacacgtgt
gtggcagagaacatggtgggcaaggcggaggcctcagccacgctcaccgtccacgtcgtg
tctgtgcccccagcgtttgtggtgagaccgaggaatcaggtggttggagttggcaggacg
gtgacgttccagtgcgaggccactgggaacccacagccggccattttctggcagagggaa
ggcagtcagaacctcctgttctcctaccaaccacctcaaccctccagccggttctctgta
tctcagaccggggatctgaccatcacagacgcagagcgctccgacatgggatactacagc
tgccaggctctgaacatcgctggcagtgtgatcaccaaggccctgcttgaggttactgat
gttgtgtcagaccgcccgccaccagttatacgacaggggcccaccaatcaaacggtggct
gtggacggaaccgtggtcctgagctgtgtgacatctggtaaccctatacccaccatcctg
tggaggaaggacggcgttttagtgtccacacatgactcgagagtcaaacagctggacacg
ggcgcgctacaaatacgatacgcaaagcttggtgacaccggtacctacacctgcatcgcc
tccactcccagtggagaggcttcatggaaagcctatttggaagttcaagaatttggatcc
cccgtccagccaaacagaccaactgacccaaacctgatacctagcgctccgtcaaaaccc
gaggtcacagacgtttcccggacctccatcaccttatcctggaaacccaacctcaattct
ggagccacacccacttcctacatcatagaggccttcagccatgcatccggcagcagctgg
cagacgttggcagagcatgtgaaaacagagtcgtttgtgctgaagggcctgaagcccagc
gcagtctacctcttcctagtgcgagcggccaatgcctacggactcagtgatcccagttcc
atctcagacgcagtgaaaacacaagacatccctcccaccagtcaaggcgtggaccatcga
cagatccaaagagaacttgcagatgtggtcatccaccttcacaaccccaccatcctctcg
tcgtcgtccgtcagggtgcagtggacagtggagcaacagtcccagtacgtccagggctac
aaggtgatgtacaggccagagggccagcagaggagcgaatgggccgtgtttgaggtccgg
acccccggagaggacagcgtcatcgtgacacagctgcggaagggcgtcacgtacgaattc
aaagtccgccccttcttcaacgagttccagggaacagacagcgacgttaaagctggcaag
accctggacgaagctcccagcgcgccccctcgtaaggtaacagtgacggagagcgggagc
aacgggactgctgttgtcgtctcctggcaaccccctccagaagaggagcagaatggggtt
gtgcaggaatacaagatctggtgtttggggaatgagagcaagtatcacatcaaccggacg
gttgacgggtcaacgctgtccgtggtcatccccagtttgacccctgggatccgttacagc
gtcgaagtcgcagccagcaccagcgccggtcccggggtcaagagtgaaaccactttcttt
cagtttgattcatctgggcgaatgaccgagaccgtgaaccaggagaacccgctctcccag
cagatctcagatgtggtcaagcagcctgcctttatcgcaggaattggagcagcatgttgg
atcatcctcatggtctttagtatctggttataccggcaccgaaagaaaaggaatggcctc
tccagcagctatgcaggcatacgcaaagtgccatccttcacattcacaccaacagtggca
tatcagaggggtggggaaagcgtcagcagtgctggaaggcccggtttgctaaacatgggc
gactcagccactcagccctggctggccgacacgtggcccaactcctgctccaaccacaac
gactgcagtatcaactgctgcacggcgggcaacggcaacagcgacagcaacctggccacg
tacagccgaccagccgactgtatcgccaattataacagccagatggataacaagcagacc
aacctcatggtaccagagtccggcgtctacggagacgtagacctgtccaacaagatcaac
gaaatgaagaccttcaacagcccgaacctcaaagatggtcgctttgtcggtcctgggggc
cagccgacgccttacgccaccacgcagctcatccagtccgccatcatgggcaacaacatg
aactcggacagagggaccggagggagcggaggtggactcgggggtggaggggaagtaaat
gagaaacactgctggaagcctccgtccatccagcagaagcaggaaatgggctctcagctt
cagtacaacatcttggagcaaaacaagctgaataaggaccggtacagaggaggcgacagt
ccaatgcccgccaccatcccctacaaccagacccatgacacacacaccggaggttcctac
aacagctcggaccgaggcagcagtagcacctctgcagggagtcagggtcataagagggga
gtacggacccccaaactacccaaacaaagcacaatgaattgggctgaccttctcccccct
cccccggcaaacccagccccaatgtgtaacacagaggagtactcattctctatggaggaa
agctgtgatcctgacatgcagtgccctatgcctcaatctcacatgtacctgcagcctgat
gagctggaggaggaggagatggagcggggtccgactcctccagtacgcggggcagcctcc
tcccctgctgctgtgtcctacagccaccagtccacggccacgctgaccccctccccccag
gaggagatgcagcccatgctccaggacgtgccggacagccacgaacgaagacgccatggt
gtgagccctcccccgcctccgaggcccctctccccctcacacacatatggctacatcagc
agtcccctggcgttggacactgacggtctggacgacgaggacatactggaggaagaggag
gaggacggggatgaaacggacgcagaagtggccaagatgcactaccaccacacccacccc
cacacgcattctcaccacccccagatgcacgcccggaggttgctactacggggcctcgaa
caaacgcccgcgtccagcatgggcgacctggagagctcggtgacgggctccatgatcaac
ggatgggggtccgcctccgaggaggataatgtctcctcggggaggtctagcgcagtcagt
tcatcagatggctccttcttcacagatgcggactttgctcaggcagttgccgccgcagca
gagtattcaggactcagggtggcaaaataccccaatccccaaggccaggaagtgggagga
gcttcagcacgaaaataccaaataaaccagctaggccaccgccctggcagcccagtgtcc
acagatagtaatatgagtatggcagctattcacagaaggcctccaaaaaagcaaaaacag
catcctgcaggacatccggggagccagcggcgtgaggcctttaatgaagatctccctcct
ccacccattcctcctccagcggtgctcaagtctcccacacatccctctaaggcggctctg
gagggccggggagtgatttcccccaaagcaggtgagggccgggacaagcggggagggggc
taccggcctcaggagggctcggaccccagaaccagctcatctgaacggaaagacgctcag
gacagacagaaggctgctcacggagggaaggggaacaaatccgagagcagcactgccaac
aaggcacggcagaacacagaggatgttctgccgtacagccgaccacagttcccaacggtc
aatagcaccagagacccaagctcctccagctccatgtcctccaggggttcggggggccgg
cggagaggggaaggagcacgcaggaaccctggagatctggtcgtcaacaactctgtagcc
tttcaccaagcagaggaggaactagagatgctagaaagctga
DBGET
integrated database retrieval system