Poecilia latipinna (sailfin molly): 106951735
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Entry
106951735 CDS
T08005
Symbol
pabpc4
Name
(RefSeq) polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106951735 (pabpc4)
09123 Folding, sorting and degradation
03018 RNA degradation
106951735 (pabpc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106951735 (pabpc4)
03041 Spliceosome [BR:
plai03041
]
106951735 (pabpc4)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106951735 (pabpc4)
mRNA cycle factors
Stress granule specific factors
106951735 (pabpc4)
Spliceosome [BR:
plai03041
]
Complex C
Other components
Complex C specific factors
106951735 (pabpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_occluded
RRM_5
RRM_7
RRM_10
RBD_RDR6
RRM_3
OB_RNB
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
106951735
NCBI-ProteinID:
XP_014894907
Ensembl:
ENSPLAG00000010112
UniProt:
A0A3B3VEI3
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNTATGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFS
QPADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIDKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFEKYGKTLSVKVMADSSGKSRGFGFVSFEK
HEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPTSGYFMPAVPQAQNRTT
YYAPNQLAQMRPNPRWQQQGGRGQGGFQGMPNSLRQPGPRSNLRHMTPSSGAQGPRGAGQ
TMGPRQSMGVPGPRAMPPYKYATSVRNPNPQVVQPIVVQQTQPAVHVQGQEPLTASMLAA
APPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHESLRSKVEEAVA
VLQAHQAKKDATQKVGGMTTTAAATS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcgacggggagttatccgatggcttctctctacgttggcgacctgcaccca
gacataacggaggctatgctgtacgagaagttcagccccgccggaccggtgctctccatt
cgggtctgcagagacatgatcacccggcgctccctcggatatgcttatgtgaacttctcg
cagcccgctgacgcggagagagccctagacaccatgaactttgacgtggtgaaagggaag
ccaatcaggatcatgtggtcgcagagagatccctccctcagaaagtccggcgtgggcaat
gttttcatcaagaaccttgacaagtccatcgacaacaaagccctgtacgacaccttctct
gcctttggcaacatcttatcatgcaaggtggtgtgtgatgaaaacggatcaaagggctac
gcgtttgtccacttcgagacgcaggacgcagcagatcgcgccattgacaagatgaacggc
atgcttctgaatgaccgcaaggtgtttgtgggtcgttttaaatctcgaaaagaacgggag
gctgaactcggtgccaaagccaaggagtttaccaatgtttacatcaagaactttggtgat
gacatggacgacgaacgactgaaggaactttttgaaaaatacggtaaaaccctgagtgtg
aaggtgatggcagactcctcgggaaaatctaggggttttgggtttgttagcttcgagaaa
cacgaggatgctaacaaggctgtggaggaaatgaatggcaccgagctgaatggtaagacc
gtctttgtaggcagagctcagaagaagatggagcggcaggcggagctgaagaggaagttt
gagcagctcaaacaagaacgaatcagtcggtatcagggagtcaatctttacatcaagaac
cttgacgacacaatcgatgatgaaaaattgcgtaaggagttttctccatttggctccatt
acaagtgcgaaggtgatgttagaagaaggccgttcaaagggcttcggcttcgtctgcttc
tcttctcccgaggaggccaccaaggctgtgacagagatgaacggacgtatcgttggctct
aaacctctgtacgtcgctcttgctcagcgcaaagaggagcgcaaagctcacctcaccaac
cagtacatgcagcgcattgctggcatgagggccatgccggctaacgccatcatcaatcag
ttccagcccacaagtgggtacttcatgcccgccgtgccccaggcccagaacaggaccaca
tactatgcaccgaaccagctggctcagatgcggcccaacccacggtggcagcagcaaggt
ggtagaggtcaaggcggtttccaaggaatgcctaactcgctgcgccagcctggaccccgg
tccaatctcagacacatgactcccagcagcggtgcacagggcccacgaggtgccggtcag
accatgggtcctcgtcagtcgatgggagttcctggccccagggccatgcctccttacaaa
tatgccaccagtgtccgtaaccccaatccccaagtggtgcaacctattgtcgtacagcag
actcagccagctgtgcatgttcagggccaggagccgctcacggcctccatgctggctgct
gcgccgcctcaggaacagaaacagatgctaggggagcgcttgttcccgctgattcaggcc
atgcatgccaacctggcgggaaagatcactggcatgctgctggaaatcgacaactcggag
ctgctgcacatgctggagtcgcacgagtctctccgttcaaaggtggaggaagctgttgca
gtgctgcaggcccatcaagcaaagaaggatgctactcagaaagtaggtggcatgacgact
actgctgctgctacatcctaa
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integrated database retrieval system
