Poecilia latipinna (sailfin molly): 106951907
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Entry
106951907 CDS
T08005
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03320
PPAR signaling pathway
plai04148
Efferocytosis
plai04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106951907
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
106951907
03320 PPAR signaling pathway
106951907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plai03000
]
106951907
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plai03310
]
106951907
Transcription factors [BR:
plai03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106951907
Nuclear receptors [BR:
plai03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
106951907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
106951907
NCBI-ProteinID:
XP_014895173
Ensembl:
ENSPLAG00000004499
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMQRGRSSEACSCFSGVCPLHQRRLSSDSSGQVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLTSPFSVISSPMGPHSMNSPGMGY
GPSISPQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVLL
HAAVQEERQRAKDKNENEVESTSCANEDMPVEKILEAEEAVEPKTETYIETNLGMPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcctgtcattggggtttttgaagccccagtgctcattggctccc
cccatgcaacgaggtcgttcgtctgaggcgtgttcatgtttcagcggtgtttgtcccctc
catcagcgtcgcctatcctcagattcttcaggacaggtgacctcctcacctttaggctct
cctacttcccatcgtggaatgcatccctctttgctgagccccacctccatgggaccctct
ggctctctccattctcccatcagcaccctgagttcaccgatgaacggcctcacctcaccc
ttctcagtcattagctcacccatggggccgcactccatgaactcacctggaatgggctac
ggccccagcatcagcccacagttgaactctccgatgaactcggtcagcagcacggaggac
attaagcccccgctgggcctcaatggcgtgatgaaggtgcccgctcagccctcaggcacg
gctctgtcgctcaccaaacacatctgcgccatctgcggcgaccgctcctcaggaaagcac
tatggtgtctacagctgtgaaggctgcaaaggcttcttcaaacgaaccgttcgcaaggac
ttgacctacacctgccgcgacaacaaggactgtgtcatcgataagcgccagaggaaccgc
tgtcagtactgccgctaccagaagtgcttggccatgggcatgaagagagaagttttgtta
catgcagccgtccaggaggagcgccagcgggccaaggacaagaacgagaacgaggtggag
tccaccagctgcgcgaacgaggacatgcccgtggagaagatcctggaggccgaggaggcg
gtggagcccaaaaccgagacctacatcgagaccaacctggggatgccgtccaactcgccc
aacgacccagtgacaaatatctgtcaggcagcagacaagcagctttttactctggtggag
tgggccaagaggattccccacttctcggagctgccgctggacgaccaggtcatcctgcta
cgagcaggttggaatgaactcctcattgcatcattttcgcaccgttccatcgcagtaaag
gatgggattctgttggcgacgggcctgcacgtgcatcgcaacagcgcccatagtgccgga
gtgggagccatctttgacagggtgctcacagagctggtgtcaaagatgagagacatgcag
atggataagactgagctgggttgcctccgagccatcgtccttttcaacccagactctaaa
ggtttgtccaacccaggtgaggttgaagctctgagagagaaagtctacgcgtctttagag
gcttactgcaaacagaaataccccgagcagccgggcaggttcgctaagctgttgctacgg
ttaccagcgctgcgctccatcgggctcaagtgtttggagcaccttttcttcttcaagctg
attggcgacacacccatcgacaccttcctcatggagatgctcgaagctcctcatcaaatg
acataa
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