KEGG   Poecilia latipinna (sailfin molly): 106952147
Entry
106952147         CDS       T08005                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03013  Nucleocytoplasmic transport
plai04141  Protein processing in endoplasmic reticulum
plai04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106952147 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106952147 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    106952147 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plai03019]
    106952147 (sec13)
   04131 Membrane trafficking [BR:plai04131]
    106952147 (sec13)
Messenger RNA biogenesis [BR:plai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106952147 (sec13)
Membrane trafficking [BR:plai04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    106952147 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106952147 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    106952147 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_EML
Other DBs
NCBI-GeneID: 106952147
NCBI-ProteinID: XP_014895564
Ensembl: ENSPLAG00000014980
UniProt: A0A3B3UGL6
LinkDB
Position
Unknown
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGAWDKMYEYTGHESSVNSVCWGPYEFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTVKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVSKGQGAVSTITDTQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttctgttattaacacagtggacacctcgcatgaggacatgattcacgatgcccag
atggattactatgggactcggcttgccacctgctcctctgaccgcaccgtcaagatattt
gatgtcaggaatggaggacagattctggtggcagatctcaggggacacgaaggccccgtg
tggcaagtagcgtgggctcacccgatgtttggcaacattctggcttcttgttcttacgac
cgaaaagtcatcatctggaaggaggagaatggagcctgggacaagatgtacgagtacacc
ggacatgaatcttcagtgaactcggtttgctggggtccgtatgaatttggtttaattctg
gcctgtggaagctcagacggggcgatttctctactcacatttactggagatcagcagtgg
gatgtcaagaagattagcaatgcacacactattggctgtaatgctgtgagttgggctcct
gctgtagtcccaggcagtctgatcgatcaaccatctggacagaaaccaaactatgtcaaa
cgtttcgtctcgggaggctgtgacaacctggttaaactctggaaagaggaggacggtcag
tggaaggaggaccagaagctggaggcgcacagtgattgggtgagagacgttggctgggct
ccttccattggtcttcccaccagcaccattgctagctgctcccaggacggccgtgtgttt
atctggacgtgtgacgaccctgctggcaacacctggacggtcaaactgctccacaagttc
aacgatgtggtttggcacgtcagctggtccatcaccggaaatatactggcagtttctggt
ggagacaacaaggtgacgctgtggaaggagtccgtggacggtcaatgggcgtgtattagc
gatgtcagcaaaggccagggcgccgtttccaccattacagacactcagcagaatgagcag
tga

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