KEGG   Poecilia latipinna (sailfin molly): 106952172
Entry
106952172         CDS       T08005                                 
Name
(RefSeq) aly/REF export factor 2-like
  KO
K12881  THO complex subunit 4
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03013  Nucleocytoplasmic transport
plai03015  mRNA surveillance pathway
plai03040  Spliceosome
plai05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106952172
  09122 Translation
   03013 Nucleocytoplasmic transport
    106952172
   03015 mRNA surveillance pathway
    106952172
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106952172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plai03019]
    106952172
   03041 Spliceosome [BR:plai03041]
    106952172
Messenger RNA biogenesis [BR:plai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106952172
    TREX complex
     106952172
Spliceosome [BR:plai03041]
 Complex C
  Other components
   EJC/TREX
    106952172
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106952172
SSDB
Motif
Pfam: RRM_1 FoP_duplication YHR127W_C FYTT RRM_3
Other DBs
NCBI-GeneID: 106952172
NCBI-ProteinID: XP_014895618
Ensembl: ENSPLAG00000014380
UniProt: A0A3B3VNR2
LinkDB
Position
Unknown
AA seq 243 aa
MADKMSMSLDEIIKMNKREGRGGEGGGFRRGGSSGRAGGSSRPPVAARSRENNFHRDRNN
RAAPYTRPRELPDKWQHDMFEENEGGGSTVPERRVDGSSSKLVISNLDFGVSDSDIKELF
EEFGPIKTASVHYDRSGRSKGMADVYFVNKADAIKAMKNYNGVPLDGRPMKIQQESSEVQ
TQSSSRGFDRSRLGQPRFERRPGGSSGGFRGRGRGGERRPQLSAEELDAQLDAYKSECQM
DTS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggctgataagatgagcatgtctctggatgagattatcaagatgaacaagagagaaggc
cgcggcggagaaggaggaggcttcaggcgaggaggaagttcaggtcgagccggtggatcg
tcgaggccgccggtggcggcgaggagccgagagaacaacttccaccgcgacaggaacaac
agagcagctccttacaccagacccagagagctgccagacaaatggcagcatgacatgttt
gaggagaacgaaggtggaggaagtacagtaccagaaagaagagtagatggtagtagcagc
aagcttgtgatttcgaatctggatttcggcgtttctgattccgatattaaggagctgttt
gaagaatttggccccatcaagactgcatcggtacactatgaccggtcgggccggagtaaa
ggaatggcagatgtctactttgtaaacaaagctgatgccatcaaagccatgaagaattat
aatggtgttcctcttgatggtcgtcctatgaaaatccagcaagaatcatcagaagttcaa
acacagagctcaagcagaggttttgaccgcagcaggctcggtcagccccggtttgaaaga
agaccaggtgggagcagtggaggtttcagaggtcgagggaggggaggtgaaagaagaccc
cagctgtcagcagaggagttggatgctcagttggacgcttacaaatcagagtgtcagatg
gacaccagctaa

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