Poecilia latipinna (sailfin molly): 106952337
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Entry
106952337 CDS
T08005
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106952337 (col1a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106952337 (col1a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106952337 (col1a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106952337 (col1a2)
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106952337 (col1a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
106952337
NCBI-ProteinID:
XP_014895871
Ensembl:
ENSPLAG00000009652
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MLSFVDTRILLLLAVTLYLTSCQSGPRGDKGPRGDRGLPGPNGKDGKPGLPGPPGPPGPP
GLGGNFAAQYDGAKAPDPGPGPPGLMGPRGPPGMPGPQGPQGQTGHSGEPGQPGHDGPVG
ARGPPGPPGKSGEDGNNGRPGKPGDRGAAGPQGARGFPGTPGLPGMKGHRGYTGIDGRKG
EPGSAGAKGESGASGSPGSPGLAGQRGQPGERGRPGPAGPSGARGSDGNVGPAGPAGPLG
AAGPPGFPGGPGTKGEVGAAGGTGPSGPQGSRGEPGPNGVVGPIGPPGNPGTNGLNGAKG
AAGTPGVAGAPGFPGPRGGPGPQGPQGAAGPRGLSGDPGPQGVKGDTGGKGEPGNAGPQG
PPGTQGEEGKRGPTGEIGANGPAGSRGARGAPGSRGLPGSDGRTGPIGMPGARGATGAAG
PRGPPGDAGRAGEPGPAGLRGLPGSPGSSGPPGKEGPSGPAGQDGRSGPPGPTGPRGQPG
NIGFPGPKGPSGEPGKPGEKGPSGPTGLRGPPGPDGNNGATGPMGVTGSPGEKGEQGPAG
APGFQGLPGPAGSVGEAGKPGERGIPGEQGAAGPAGGKGERGNPGAAGASGAQGPIGPRG
PAGAPGPDGGKGEPGAAGAAGAAGHQGSAGIPGERGVAGAPGGKGEKGETGHRGPDGNPG
RDGARGPAGPPGPPGPTGANGDKGEVGSFGPSGPAGPRGPSGERGEVGPAGAPGFAGPPG
LDGQSGARGERGPAGAKGEAGSAGPAGPAGQSGPAGPSGPAGPPGARGETGPPGLTGLPG
AAGRVGAPGPAGIVGPPGPSGNAGKDGPRGLRGDPGPAGPSGEQGMVGPPGPPGEKGPSG
ESGPAGIPGAPGPTGPLGITGFVGLPGARGDRGLPGGPGPAGEPGRPGPPGPSGARGPPG
NIGMPGMTGPQGEAGREGSPGNDGPPGRPGASGFKGDRGEPGSPGALGLAGAPGPAGPTG
AAGRPGNRGEAGPSGPSGPAGPAGARGAPGPAGPRGEKGVAGDKGDRGMKGLRGHPGLQG
MPGPSGPPGESGPAGALGHAGPRGPAGPNGPPGKDGRAGTHGPMGPPGSRGPPGYVGPVG
PPGSPGLPGPPGPSGGGYDVSGYDEYRADQPALRAKDYEVDATIKSLNTQIDNLLTPEGS
RKNPARTCRDIKLSHPDWSSGFYWIDPNQGCINDAIKVFCDFTTRETCIYAHPESIARKN
WYRSTENRKHVWFGETINGGTEFTYNDETLSPQSMATQLAFMRLLSNQASQNITYHCKNS
IAYMDGESGNLKKAVVLQGSNDVELRAEGNSRFTFSVLEDGCTTHTGEWSKTVIEYRTNK
PTRLPILDIAPLDIGGPDQEFGLDIGPVCFK
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatactcggattctgttgctgcttgcagtaacattatatctaaca
tcatgccaatcgggtcccagaggagacaaaggacctcgaggtgacaggggcttacctggc
cctaatggaaaagatggcaaacccggactccctggcccccctggcccccctggcccccct
ggactcggaggaaactttgctgctcaatatgatggtgccaaagcccccgatcctggaccc
ggacccccaggactgatgggacccagaggtccccctggaatgcctggaccccagggacct
caaggacagactggacactctggtgaacccggacagcctggacacgatggccccgttgga
gcccgtggaccccctggaccacctggcaaatctggagaagatggaaacaatggcagacct
ggcaagcccggagacagaggtgccgccggccctcagggtgctcgtggattcccaggaact
cctggacttccagggatgaagggacacagaggttacactggtattgatggacgtaaggga
gaacccggctctgctggcgccaagggtgagtctggtgcctctggatctcctggaagtcct
ggactggccggacaacgtggtcagcctggtgagagaggtcgccccggccctgctggtcct
tctggtgctcgtggttctgatggcaatgttggacctgctggcccagctggtcctttgggt
gctgctggccccccaggcttcccaggcggtcctggaaccaagggagaggttggagctgct
ggaggcactggcccatctggacctcagggatccagaggagagcccggacccaatggtgtt
gttggcccaattggtccccctggcaaccctggtactaatggtctgaatggagccaaggga
gctgctggaacccccggtgttgctggagctcctggtttccccggaccaagaggaggaccc
ggacctcagggacctcagggtgctgctggaccaagaggactttctggtgatcccggtcct
cagggtgtcaagggagacactggtggcaaaggagagcctggtaacgctggccctcaggga
cctcccggaactcaaggtgaggagggcaagagaggacccactggtgagattggtgctaat
gggcctgctggcagccgtggtgctagaggtgctcccggaagccgtggtctgcctggttcc
gacggaagaactggcccaattggtatgcctggtgcccgtggtgctactggtgctgctgga
cctcgtggaccccctggagatgccggtcgtgctggcgagcctggccctgctggtctcaga
ggtctcccaggaagccctggaagctctggacccccaggaaaggagggaccttctggtcct
gctggacaagatggccgttctggacctcctggcccaactggacctagaggccagcccgga
aacattggtttccctggacccaaaggaccctctggagagcctggcaaacctggagagaag
ggacccagtggccccactggactgagaggaccccctggacctgatggcaacaacggagcc
actggccccatgggagttactggcagtcccggtgagaagggagagcagggaccagctgga
gctcctggcttccagggtctgcctggacctgctggatctgtcggtgaggctggcaagcct
ggagagagaggtatcccaggagagcagggagccgctggaccagctggtggcaagggagag
cgtggtaacccaggtgctgctggagcttctggagctcagggaccaattggaccccgtgga
ccagctggagcccccggacctgatggtggcaagggagagccaggagctgctggagctgct
ggggctgccggacatcaaggatctgctggaatccctggagagcgtggcgtagccggtgct
ccaggaggcaagggagagaagggagagaccggacacagaggccctgatggaaatcctggc
agagatggcgctcgtggccctgctggacctcctggccctcctggacccactggagccaac
ggtgataagggtgaagttggttcctttggaccttctggccctgctggacctcgtggaccc
tctggtgagcgtggagaggttggacctgccggagcccccggatttgctggaccccctggt
ctcgatggtcagtccggagccagaggagagcgtggacccgccggagctaagggagaggct
ggatccgctggccctgctggacccgctggacagtctggacctgctggcccctctggccct
gctggacctcctggcgctcgtggagaaactggtcctccaggtctgaccggtttgcctggt
gctgctggcagagttggtgctcccggccctgctggtattgtgggacctcctggcccctcc
ggtaacgctggcaaagacggacctcgtggtctccgtggcgaccctggtcctgctggtcct
tctggtgagcagggaatggttggaccacccggtcctcccggagagaagggaccctccgga
gagtctggtcccgctggaattcctggtgctcctggacccactggacctctgggaattaca
ggattcgttggtctgcctggtgctagaggagatcgtggtttacctggtggtcctggtcct
gcgggagagcctggcagacctggacctcccggtccatctggagcccgtggtccccctggt
aacattggcatgcctggtatgaccggacctcaaggagaggctggacgcgagggtagccct
ggtaacgatggaccccctggtcgtcccggtgcttctggattcaagggagaccgcggtgag
cctggatctcctggtgccttgggacttgctggtgctcccggacctgccggaccaactgga
gctgctggcagacctggaaaccgtggagaggctggcccatcaggtccttctggacccgct
ggacccgctggagccagaggcgccccaggacctgccggaccccgtggtgagaagggagtt
gctggagacaagggagacagaggcatgaagggtcttcgtggacatcctggtctccaggga
atgcctggaccttctggacctcctggtgagagcggtcctgctggagcccttggacatgct
ggacctagaggacctgctggacccaatggaccccctggtaaagatggtagagctggcaca
catggtcctatgggtcctcctggttcccgtggacctcctggatatgttggaccagttggc
cctcctggatctcctggtctgcctggacctcctggcccatctggtggcggatacgacgtc
tccggatacgacgaatacagagctgatcagccagctctcagagccaaggactacgaagtc
gatgccaccatcaagtctctcaacacccagattgacaacctgcttacccccgagggatcc
agaaagaaccctgcccgcacctgccgtgacatcaagctcagccaccccgactggagcagc
ggattctactggatcgaccccaaccagggctgcatcaatgatgccatcaaggtcttctgc
gactttaccacccgcgagacctgcatctatgcccacccagagagcattgcacgcaagaac
tggtacagaagcacagaaaacaggaagcacgtgtggttcggagagaccatcaacggcggc
accgagttcacctacaacgacgagaccctcagcccacagagcatggccacgcagctggct
ttcatgcgcctgctttccaaccaggctagccagaacatcacctaccactgcaagaacagc
attgcctacatggatggtgagagcggcaacctgaagaaggccgttgtgctccagggctcc
aacgatgtggagctcagggccgagggcaacagccgcttcaccttctccgtgctggaggat
ggctgcactacacacactggtgagtggagcaagacagtgattgagtacagaacaaataaa
ccaactcgcctccccatcctcgacattgcacctttggacattggtggacctgatcaggag
tttggtttggacattggcccagtctgtttcaaataa
DBGET
integrated database retrieval system
