Poecilia latipinna (sailfin molly): 106953100
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Entry
106953100 CDS
T08005
Symbol
upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03013
Nucleocytoplasmic transport
plai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106953100 (upf2)
03015 mRNA surveillance pathway
106953100 (upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106953100 (upf2)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106953100 (upf2)
mRNA cycle factors
P-body specific factors
106953100 (upf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
106953100
NCBI-ProteinID:
XP_014897133
Ensembl:
ENSPLAG00000005094
UniProt:
A0A3B3V8T6
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MPAESKPSVNMDEKDVNSFSNKEKEKDKEDERRAASARDKAKEEAKASSKKDAGKEEKKK
RLEEEKKKKEEKERKKKEEEKQKAEEDQKKKEEEEKKQQEELQKKLEEDEAKRQREEEAA
LLKEKEEGHQLHQEAWERHQGRKELRSRNQNAQEARPEEAFFSRLDSSLKKNTAFVKKLR
TLTEQQRDALSNDFASLNLSKYIGEAVSSLVEAKLKISDVGCAVHLCSLFHQRYAEFAPL
LLQAWKKHFEARKEDKAPNVSKLRTDLRFIAELTIVGLFTDREGLSLIYEQLKNIIGTDR
ETHTHVSVVISFCKHCGDDIAGLVPRRVKLAAEKFGLAFPPSEIISTEKQQPFQNLLREY
FTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQTLADL
LDENMPELPQDKTVQEEHGPGIDIFTPGKPGEYELEGGIWEDEDARNFYENLIDLKAFVP
AILFKDNEKSGLSKDKDDAKDGREGKDVSATEELELELEALDIADEPLELEGGDEVENEE
LAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRR
KLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSMLKGDFRFHIRKKDQINIET
KNKTVRFIGELSKFKMFSKTDTLHCLKMLLSDFTHHHIEMACTLLETCGRFLFRSPDSHL
RTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPIEKAVKKKRPPLQEYIRKLLYKD
LSKVTTEKVLRQMRKLPWQEPEVKGYLICCMINIWNVKYNSIHCVANLLAGLVAYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVVFRTLFSFISFGVN
PDGSPSPLDPPEHLFRIRLVCTLLDTCGQYFDRGSSKKKLDCFLIYFQRYIWWKKSVDVW
TKDHPFPIDIDYMISDTLELLRPKMRLSCSLDDATRQVADLEREVLVKLGMAMEKDGRSS
AMSEGEPLDEEDEDEDEEGAADTEEQSGNESEMNEQEEDEGSENEEEEREEEEEENTDYL
TDSNKENETDEENNEVTIRGGGLKHVACAEDEDFIQALDKMMLENLQQRSGEAVKVHQLD
VAIPLQLKSQLKKGGSGQQCMGEGDSDISDTMQFVMLTRKGNKQQYKILNVPLSSHLAAN
HFNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMQSFAQRPAPANTNRERRPRYQHPKG
APNADLIFKTGGSREKRARIEKHEVQGRQRDRDRKAKQQRQQGQAVE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgagagcaagccctcagtaaacatggatgaaaaagacgtcaactccttcagc
aacaaagaaaaagagaaggacaaagaggatgaacggagggcggcatctgctagagacaag
gctaaagaggaggcgaaagccagcagtaaaaaggatgcaggcaaggaggagaagaaaaag
cgcttagaggaggaaaagaagaagaaggaggaaaaggagcgaaagaagaaagaggaggaa
aagcagaaagcggaggaggatcagaagaagaaagaggaggaggagaagaagcaacaggag
gagctgcagaagaagctcgaagaagatgaggccaaacggcagcgtgaggaagaggcagcg
ctgctcaaggaaaaggaggagggccaccagctgcaccaggaggcctgggaacggcatcag
ggccggaaggagctccgcagccggaaccagaacgcccaggaggcccgacccgaggaggcc
ttcttcagccgcctggactccagcctgaagaagaacacggccttcgtcaagaagctgcgc
acgctgacggagcagcagcgcgacgcgctctccaacgacttcgcctcgctcaacctcagc
aagtacatcggcgaggcggtgagctcgctggtggaggccaagctgaagatctccgacgtg
ggctgcgccgtgcacctgtgctccctcttccaccagcgctacgctgagttcgcgccgctg
ctgctgcaggcctggaagaagcacttcgaggccaggaaggaggacaaggcgcccaatgtg
agcaagctccgcaccgacctgcgcttcatcgccgagctcaccatcgtcggcctgttcacc
gacagggaggggctgtcgctgatctacgagcagctgaagaacatcatcgggacggaccgc
gagacgcacacacacgtgtcggtggtgatcagcttctgcaagcactgcggcgacgacatc
gccggtctggtgccgcgcagggtgaagttggcggcggagaagttcggcctggcgttcccg
ccgagtgagatcatcagcaccgagaagcagcagccgttccagaacctgctgagggaatac
ttcacctccctgaccaaacacctgaagaaggaccaccgggaactgcagaacatcgagagg
cagaaccggcggatcttgcattccaaaggcgagctgagtgaggatcgccacaagcagtac
gaggagttcgccacgtcttaccagaaactgctggccaacacgcagacactggccgacctg
ctggacgaaaacatgccggagctgccgcaggacaagactgtgcaggaagagcacggcccc
ggcatcgacatcttcacccccgggaaacccggagagtacgaactggaaggcggcatctgg
gaggacgaagatgcgcgaaacttctacgaaaacctgatcgacctgaaggctttcgttcct
gccatcctgttcaaggacaacgagaagagcggcctgagcaaagacaaggacgacgccaaa
gatggcagagaagggaaagacgtgagcgccacagaagagctggagctggagctggaggcg
ctggacatcgcagacgagcctctggagctggagggaggagacgaggtggagaacgaggag
ctggccaagaagctgctggatgagcaagagcaagaagacgaggaggccagcaccgggtcg
cacctgaagctgatcgtggacgccttcattcagcagcttcctaactgtgtcaacagagac
ctgatagacaaggccgccatggacttctgcatgaacatgaacaccaagtccaaccggagg
aaattggtccgggccctgttcaccgtccccaggcagaggttggatcttctgcctttctac
tctcgcctggtggcgacgctgcatccctgcatgtcagacgtagccgaggatctttgctcc
atgctgaagggagacttcaggttccatatccgtaagaaggaccagatcaacatcgagacc
aaaaacaaaacggtgcgattcatcggagaactttccaagttcaagatgttctcaaagacc
gacacgctgcactgcctgaagatgctgctgtctgatttcacccaccaccacatcgagatg
gcctgcacactgctggagacctgcggccgcttcctgttccgctcgcccgactctcacctg
cggaccagcgtcctgctggaacaaatgatgcgtaaaaagcaggcgcagcacctggacgcg
cgctacgtcaccatggtggagaacgcctactactactgcaacccgccgcccatcgagaag
gccgtgaagaagaagcggccgccgctgcaggagtacatcaggaagctgctgtacaaggac
ctgtccaaggtcaccacggagaaggtgcttcggcagatgcgcaagctgccgtggcaggag
cccgaggtgaagggctacctgatctgctgcatgatcaacatctggaacgtcaagtacaac
agcatccactgcgtggccaacctgctggccggcctggtggcgtaccaggaggacgtgggc
atccacgtggtggacggcgtcctggaggacatccggctcggcatggaggtcaaccagccc
aagttcaaccagcggcggatcagcagcgccaagttcctgggtgagctctacaactaccgc
atggtggagtcggccgtggtcttccggaccctcttctccttcatctccttcggggtgaac
ccggacggcagccccagcccgctggacccgccggagcacctgttccgcatccggctcgtc
tgcacgctgctcgacacctgcggccagtacttcgaccgcggctccagcaagaagaagctc
gactgtttcctcatctacttccagcggtacatttggtggaagaagagcgtggatgtttgg
acgaaggatcacccgttccccatcgacatcgactacatgatcagcgacacgctggagctg
ctgcggcccaagatgcggctcagctgctcgctggacgacgccaccaggcaggtggccgac
ctggagagggaagttctcgtcaaactgggcatggccatggagaaggacggccgctccagc
gccatgagtgaaggcgagccgctcgatgaggaagacgaggatgaggacgaagagggagcc
gctgacacagaggagcagtcgggcaacgagagcgagatgaacgaacaggaagaggatgaa
ggatctgagaacgaggaagaggagcgtgaggaagaggaggaggagaacacagattacctg
accgactccaacaaggagaacgagacggacgaggagaacaatgaagtgacgatccgcggc
ggaggactgaagcacgtcgcctgcgctgaggacgaagacttcatccaggctctggataag
atgatgctggagaacctgcagcagcgcagcggcgaggcggtgaaggtgcaccagctggac
gtggccatcccgctgcagctgaagagccagctgaagaagggcggctccggccagcagtgc
atgggagagggcgactcggacatctccgacaccatgcagttcgtcatgctcacacgcaaa
ggaaacaagcagcagtataagatcctgaacgttcccttgtcgtcccacctggcggcgaac
cacttcaaccagcagcaggcggagcaggaggagaggatgaggatgaagaaactcaccctg
gacatcaacgagaggcaggagcaggaagactaccaggagatgatgcagtcgttcgcccag
cgtccggctccggccaacaccaaccgggagcgccggccgcgctaccagcacccgaaaggc
gctcccaacgccgacctcatcttcaaaaccggaggaagcagagagaaaagggcgagaatt
gaaaagcatgaggtccaaggcaggcagagggacagagacaggaaagccaagcagcagaga
cagcagggacaagctgtggaataa
DBGET
integrated database retrieval system
