KEGG   Poecilia latipinna (sailfin molly): 106953123
Entry
106953123         CDS       T08005                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03082  ATP-dependent chromatin remodeling
plai03083  Polycomb repressive complex
plai04110  Cell cycle
plai04330  Notch signaling pathway
plai04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106953123
   03083 Polycomb repressive complex
    106953123
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    106953123
   04350 TGF-beta signaling pathway
    106953123
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    106953123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plai03036]
    106953123
Enzymes [BR:plai01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106953123
Chromosome and associated proteins [BR:plai03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106953123
   HDAC complexes
    Sin3A-HDAC complex
     106953123
    BRAF-HDAC complex
     106953123
    REST complex
     106953123
    SHIP complex
     106953123
    MiDAC complex
     106953123
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106953123
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106953123
  Chromatin remodeling factors
   NuRD complex
    106953123
SSDB
Motif
Pfam: Hist_deacetyl Glypican RNA_polI_A34
Other DBs
NCBI-GeneID: 106953123
NCBI-ProteinID: XP_014897167
Ensembl: ENSPLAG00000004732
UniProt: A0A3B3TSM2
LinkDB
Position
Unknown
AA seq 482 aa
MALSQGTKKKVCYYYDGDVGNYYYGQXHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPKEEIK
TT
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattattatgacggtgacgtgggg
aactattactacggccaangtcatcccatgaagccccacaggatccgcatgacgcacaac
ctcctcctcaactacggactctacaggaaaatggagatctataggccacacaaagccagc
gctgaagagatgaccaagtaccacagtgacgactacatcaagttcctgaggtccatccgt
ccagacaacatgtctgagtacagcaaacagatgcagagatttaatgtcggagaggactgt
ccagtttttgacggtctgtttgagttttgccagctctcgacaggtggctcagtcgctgga
gcagtgaagctgaacaagcagcagacggacatcgccatcaactgggctggaggactccac
cacgccaagaagtctgaggcgtccggcttctgctacgtcaacgacatcgtcctcgccatc
ctggagctgctgaaataccaccagagggtgctctacatagacatcgacatccaccatggc
gacggcgttgaggaggccttctacaccacagacagggtcatgaccgtttccttccacaaa
tacggggaatacttccccggcactggagatctgagggacatcggagcaggaaaaggcaag
tactacgccgtaaactaccctctaagagacggcatcgacgatgagtcttatgaagccatc
ttcaaacctattatggctaaagtcatggagatgtaccagcccagtgctgtggttctgcag
tgtggagcagattctctttctggagaccgactgggctgcttcaacctcaccatcaaaggc
catgccaagtgcgtggagtacatcaaaagcttcaacctacctctgctgatgctgggtgga
ggcggctacaccatccgcaacgtcgcccgctgctggaccttcgagacggctgtggccctg
gactcgtccatccccaacgagttgccctacaacgattactttgaatactttgggcccgac
ttcaagctgcacatcagcccgtccaacatgaccaaccagaacaccaacgagtatctggag
aagatcaagcagcgtctctttgagaacctgcgcatgctgcctcacgcccccggagtccag
atgcaggccatccccgaggacgccccgcaccccgacagtggagacgaggacgaggaggac
cctgacaaacgcgtctccatccgggcccacgacaagaggatagcctgtgaggaagagttc
tcagactctgaggacgaggctgaggggcaaggtggcggccgcaggaacgcagccaatcac
aaaaaggcaaagagagtgaagaaggaggaagagaaggaaggagaggaaaagaaagaagtc
aaagaggaagagaaagaggaggagaagatggacacatctggaccaaaagaggagataaag
acaacttga

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