Poecilia latipinna (sailfin molly): 106953123
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Entry
106953123 CDS
T08005
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03082
ATP-dependent chromatin remodeling
plai03083
Polycomb repressive complex
plai04110
Cell cycle
plai04330
Notch signaling pathway
plai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106953123
03083 Polycomb repressive complex
106953123
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106953123
04350 TGF-beta signaling pathway
106953123
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106953123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plai03036
]
106953123
Enzymes [BR:
plai01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106953123
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106953123
HDAC complexes
Sin3A-HDAC complex
106953123
BRAF-HDAC complex
106953123
REST complex
106953123
SHIP complex
106953123
MiDAC complex
106953123
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106953123
Heterochromatin formation proteins
Other heterochromatin formation proteins
106953123
Chromatin remodeling factors
NuRD complex
106953123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Glypican
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
106953123
NCBI-ProteinID:
XP_014897167
Ensembl:
ENSPLAG00000004732
UniProt:
A0A3B3TSM2
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQXHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPKEEIK
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattattatgacggtgacgtgggg
aactattactacggccaangtcatcccatgaagccccacaggatccgcatgacgcacaac
ctcctcctcaactacggactctacaggaaaatggagatctataggccacacaaagccagc
gctgaagagatgaccaagtaccacagtgacgactacatcaagttcctgaggtccatccgt
ccagacaacatgtctgagtacagcaaacagatgcagagatttaatgtcggagaggactgt
ccagtttttgacggtctgtttgagttttgccagctctcgacaggtggctcagtcgctgga
gcagtgaagctgaacaagcagcagacggacatcgccatcaactgggctggaggactccac
cacgccaagaagtctgaggcgtccggcttctgctacgtcaacgacatcgtcctcgccatc
ctggagctgctgaaataccaccagagggtgctctacatagacatcgacatccaccatggc
gacggcgttgaggaggccttctacaccacagacagggtcatgaccgtttccttccacaaa
tacggggaatacttccccggcactggagatctgagggacatcggagcaggaaaaggcaag
tactacgccgtaaactaccctctaagagacggcatcgacgatgagtcttatgaagccatc
ttcaaacctattatggctaaagtcatggagatgtaccagcccagtgctgtggttctgcag
tgtggagcagattctctttctggagaccgactgggctgcttcaacctcaccatcaaaggc
catgccaagtgcgtggagtacatcaaaagcttcaacctacctctgctgatgctgggtgga
ggcggctacaccatccgcaacgtcgcccgctgctggaccttcgagacggctgtggccctg
gactcgtccatccccaacgagttgccctacaacgattactttgaatactttgggcccgac
ttcaagctgcacatcagcccgtccaacatgaccaaccagaacaccaacgagtatctggag
aagatcaagcagcgtctctttgagaacctgcgcatgctgcctcacgcccccggagtccag
atgcaggccatccccgaggacgccccgcaccccgacagtggagacgaggacgaggaggac
cctgacaaacgcgtctccatccgggcccacgacaagaggatagcctgtgaggaagagttc
tcagactctgaggacgaggctgaggggcaaggtggcggccgcaggaacgcagccaatcac
aaaaaggcaaagagagtgaagaaggaggaagagaaggaaggagaggaaaagaaagaagtc
aaagaggaagagaaagaggaggagaagatggacacatctggaccaaaagaggagataaag
acaacttga
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