Poecilia latipinna (sailfin molly): 106953159
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Entry
106953159 CDS
T08005
Symbol
pabpc1
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106953159 (pabpc1)
09123 Folding, sorting and degradation
03018 RNA degradation
106953159 (pabpc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106953159 (pabpc1)
03041 Spliceosome [BR:
plai03041
]
106953159 (pabpc1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106953159 (pabpc1)
mRNA cycle factors
Stress granule specific factors
106953159 (pabpc1)
Spliceosome [BR:
plai03041
]
Complex C
Other components
Complex C specific factors
106953159 (pabpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_3
RRM_occluded
HTH_58
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
106953159
NCBI-ProteinID:
XP_014897217
Ensembl:
ENSPLAG00000004114
UniProt:
A0A3B3TQ99
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFER
HEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRA
AYYSANQLAQLRPSPRWAAQGVRPQHFQNMPNAMRPSAPRPQTFNTIRATTTTNTQVPRM
MASQRMPTQALGQRPASASATAAPVRTMPQYKYAAGVRNPQQHMASQPQVAMQQPAVHVQ
GQEPLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKSTTPAGVPSV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcgcgcctagctaccccatggcctcgctctacgtaggagacctgcaccca
gatgttaccgaggccatgctctacgagaaattcagcccggccggacccatcctgtctatc
agagtgtgcagagacatgatcacccggcgttcgctaggatatgcgtatgttaacttccaa
caaccagctgacgctgaaagggctttggacacgatgaacttcgatgtgattaagggcagg
cctctccgcatcatgtggtcccagcgtgacccctccttgaggaagagcggggtgggaaac
atcttcatcaaaaacctcgacaagtccattgacaacaaggccctttatgacaccttctct
gcgtttggaaacatcctctcttgcaaggtggtttgtgatgaaaatggctcaaaaggttac
ggttttgtgcactttgagacccacgaagcagctgagcgtgccattgagaaaatgaacggc
atgttgctcaatgacagaaaagtatttgtcggccgcttcaagtcgcgcaaagagagggag
gctgagctgggggcacgtgccagagagtttaccaacgtttacatcaaaaacttcggggaa
gacatggatgatgagaagctgaaggagttatttagcaaatatggtcctgcgctcagcatc
cgggtcatgacggacgagagcggcaagtccaagggattcggcttcgtcagcttcgagagg
cacgaagacgctcagaaagccgtggacgacatgaacggcaaagaactgaatggccgacag
gtgtatgtgggccgcgcacagaagaagggcgagcgccagaatgaacttaagcgcaaattt
gagcagatgaagcaagatcgcatgaccagataccagggtgtcaacctgtacgttaaaaac
ctcgacgatggcctagacgatgagcgtttgcgcaaggagttctccccgttcgggaccatc
accagtgcgaaggtgatgatggagggcggccgcagcaaaggtttcgggttcgtgtgcttt
tcatcgcctgaagaggccactaaagctgtgacggaaatgaatgggcgcattgtggctacg
aagcctctgtatgtggcgctggctcagcggaaggaagagcgccaggcccacctgaccaac
caatacatgcagaggatggccacggtccgagccgtgcccaaccctgtcctcaacccctac
cagcccgctccgccctcaggctacttcatggcagctattccacaggctcagaaccgcgct
gcgtattactccgccaaccagttggcccagctccgccccagtcctcgctgggctgctcag
ggagtgcgacctcagcatttccaaaacatgcccaacgccatgcgtccctcagcaccaagg
ccccagaccttcaacaccattcgtgctaccactaccaccaacacccaggttccgcgcatg
atggcctcccagcgcatgcccacccaggccctcggccagcgccctgcaagcgcttcagcc
actgcagccccagtccgtaccatgcctcagtacaaatatgctgccggtgtgcgcaacccc
cagcaacacatggcgtcccaaccacaagttgccatgcagcaacctgctgtccatgtccaa
ggtcaggagcccctgactgcttccatgctggctgctgctcctcctcaggagcagaagcag
atgctgggtgagcgtctgttccccctgatccagaatatgcaccccagcctggctggtaag
atcaccggtatgcttctggagatagacaactctgagctgcttcacatgcttgagtcacct
gaatctctgcgctccaaggtggatgaggctgttgctgtgcttcaggcccaccaggccaaa
gaggctgcgcagaagtccaccacacctgccggtgttcccagcgtctaa
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