Poecilia latipinna (sailfin molly): 106953507
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Entry
106953507 CDS
T08005
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106953507 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106953507 (cnot3)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106953507 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106953507 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106953507
NCBI-ProteinID:
XP_014897813
Ensembl:
ENSPLAG00000013324
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MSAVRLVGVNVSFSLCKPISLFDRRNVEIVVVRAMADKRKLQGEIDRCLKKVAEGVEQFE
DIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLVENRKLIET
QMERFKVVERETKTKAYSKEGLGLAQKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEV
ESLSVQTRKKKGDKEKQDRIDELKRLIERHRYHIRMLETILRMLDNDSVPVDAIQKIKDD
VEYYIDSCQDPDFEENEFLYDDLDLEDIPPALVATSPSGNVEDDMYLHSSSTPTSTTSSS
PIPPSPATCTAENSEDDKKRGRSTDSQVSQSPVKNGAPSLQSSFSSSATSGSSSSSSLSM
ASVVGGIPAVPTSSSLIGSFSSAVQQHQHQSAQQQQQSQPSNPSQQQQQQSQTKPSAPSN
NNNPSPPSNPLLPASTAPSLSTPSTPSLTAPNSQSSAGPTPASSLGLGLGLDLRKGGMSG
TSSANQMPSLGLAGHSTPLNTMAGLIQGSTSALYAHAAASGGLGLSSTTQSSILPESSTS
ISNSSSSGVTTNGAGSGLSLLGSSPAHNSLTGSILGLVPGQSVAPTTSQVPPSPASSAPG
SVSMMVGNGGSAGVVGVNAAPARPPSGLKQNGSPSYSAVVAESSTESALSTPSQSQSSQT
SSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDSTPGGGSLLNGPHSYPQASEGLKAPE
PLSSLKAMAERAALGSGLDGEISNMHVNDIFSGSSAAPGTPAAPQPSVSEVSIPPSLGVC
PLGPTPLSKDQLYQQAMQEAAWTHMPHPSDSERIRQYLMRNPCPTLPYHHQVPPHHSDTI
EFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgtccgtttagtcggtgttaacgtcagtttcagtctctgcaaaccgatatca
ctttttgacagacggaatgtggaaattgtcgtagtcagagccatggctgataaaagaaaa
ctacaaggtgaaattgacagatgtttgaaaaaagtagcggaaggtgttgaacagtttgag
gacatctggcaaaaactccacaatgcagctaatgcgaaccagaaggaaaaatatgaagct
gacctcaagaaagagattaaaaaattacagcgattgagagatcaaataaaaacatgggtg
gcctcgaacgagatcaaagacaaacggcagctagtagagaaccgaaaactaatagagacg
caaatggagcggttcaaagtggtggaacgtgaaacaaaaacaaaagcctactctaaagaa
ggcttaggacttgctcagaaggtggatccagctcagagggaaaaggaggaaacgggacag
tggctaacaaatacaatagacacactaaatatgcaggtggatcagtttgagagtgaagtg
gagtcactttcagtccagacgcgaaaaaagaagggtgacaaagagaagcaagatcgcatc
gatgaactaaagcggttgattgagaggcacagataccacattcggatgttggagactatt
ctacggatgctggacaacgactctgtaccggtggacgctatccagaagatcaaggatgac
gtcgagtactacattgattcctgtcaagacccggactttgaggagaacgagttcctgtat
gacgacttagacctggaagacatccctccggcgttagtcgccacgtctccgtcaggcaac
gtggaagatgacatgtatctccactccagcagcactcccacctcaacaacatcttcttcg
cccatccctccatctccggccacttgcactgctgagaactcagaggacgataagaaaagg
ggacggtcgacagacagtcaagttagtcagtcgcctgtgaagaacggtgccccatccttg
caatcttccttctcttcttccgccacctccgggtcctcttcttcctcctccctctccatg
gcgagcgtcgttggaggcattcccgccgttcccaccagcagcagtctcataggaagtttc
agcagcgcggtacagcaacatcagcatcaatctgcacaacagcagcaacaatctcagccg
tcgaatccgtcgcagcagcaacagcagcagtctcaaacaaaaccgtcagctccctcaaac
aacaacaaccctagcccacctagcaacccacttctcccagcgtccaccgccccgtcactc
tccacgcccagcacacccagtttaacagctcccaactcccagtccagcgccgggccgacc
ccggcgtccagcctaggactggggctgggcttggatttaaggaaaggcggcatgagcggg
accagcagtgccaaccagatgccgagtttaggcctggctggccacagcactcctttaaac
acaatggccggtctgatccaaggctccacgtcggccctttacgcgcacgcggcggcgtct
gggggcctgggtctgagcagcaccactcagtccagcattttgccagagagtagcacttcc
atctccaattcgagttccagcggggtcaccaccaacggagcggggtcggggctcagcttg
ctgggctccagcccggcccacaactctctcactggcagcatcctgggtctggtccctggg
cagagcgtggcccccactacatcacaggtgcccccaagtcccgccagctccgcccccgga
tccgtcagcatgatggtgggaaacggagggagcgccggtgtggtcggagtgaacgccgct
cccgccagaccgccgagcggactgaagcagaacggaagcccaagttacagcgctgtagtg
gcagagagctccacagaatcagctctaagcacaccgagccagtcgcagagcagccaaacc
tcgtcactcagttcctcaaccagccagccgatggacaacggccccagcttaatcagctcc
atcacactgccccccagctctccctcgccctctttctcagacagcacaccgggcggaggg
agcctcctcaacgggccccactcgtatccgcaggcctctgagggcctcaaggctccggag
cccctcagctctctgaaggcgatggctgagagagcagcgctgggatcgggattagatgga
gagatttccaacatgcatgtaaacgacatcttctctggttcgtcggcagcgccgggcacg
cccgccgctcctcagccgtccgtgtcggaggtcagcatccccccctcgctcggggtctgt
ccgctgggcccgacccctctctccaaagaccagctgtaccagcaggccatgcaggaggca
gcatggacacacatgccacacccttctgactccgagaggatcaggcaatatctgatgagg
aatccctgccctactttgccataccaccatcaagtcccgccgcaccactctgacaccatc
gagttctaccagaggctctccacagaaacgctcttcttcatcttctactacctggagggc
accaaggctcagtatctatctgccaaggctctgaagaaacaatcatggaggtttcacacc
aagtacatgatgtggtttcagaggcacgaagagcccaagacgatcactgatgagtttgaa
cagggcacttacatttacttcgactatgagaaatggggccagaggaaaaaagaggggttc
accttcgagtacaggtacctcgaggacagagacttgcagtga
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