Poecilia latipinna (sailfin molly): 106953724
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Entry
106953724 CDS
T08005
Name
(RefSeq) syndecan-3-like isoform X1
KO
K16338
syndecan 4
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04512
ECM-receptor interaction
plai04514
Cell adhesion molecule (CAM) interaction
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106953724
04514 Cell adhesion molecule (CAM) interaction
106953724
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106953724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plai00535
]
106953724
Proteoglycans [BR:
plai00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
106953724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glt_symporter
DUF1757
LapA_dom
Motif
Other DBs
NCBI-GeneID:
106953724
NCBI-ProteinID:
XP_014898175
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All DBs
Position
Unknown
AA seq
162 aa
AA seq
DB search
MRLSLTVSVVLALGLILPERVSLSGPPEDWEGSGYDLDGSGSGDDPEQKGTNNNPDPDIV
PNPVDGNTNSAKSSSVLNVGRSHRHDGDAATELIVISNNNSLLENKEIVAVATAGGVTGA
IIGVLLSAILIYKWRKKHKEEHIKNKASNEEYHKPTREVTFI
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgcggttatccctgacagtgtccgtggttttagcactgggattaatccttcctgaaagg
gtgtcgctttctggacctccagaggactgggagggatctggatatgacctggatggttct
ggttccggagatgatccagaacaaaaagggaccaacaacaatcctgacccggatattgta
ccaaaccctgtagatggaaacacaaattctgccaaaagctcgtcagtgctgaatgtgggg
agatcacacaggcatgacggagacgctgcaacagaattgattgttatctcaaacaacaac
agcttactggaaaacaaggagatcgttgcagttgccactgcggggggagtaactggagca
ataataggagttctgctatcagcgatcctgatttacaaatggaggaagaaacacaaagaa
gaacatattaagaacaaggcttcaaatgaagaataccacaaacccactcgggaagtaact
tttatttaa
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