Poecilia latipinna (sailfin molly): 106954396
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Entry
106954396 CDS
T08005
Symbol
smg5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106954396 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106954396 (smg5)
03032 DNA replication proteins [BR:
plai03032
]
106954396 (smg5)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106954396 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
106954396 (smg5)
DNA replication proteins [BR:
plai03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106954396 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
106954396
NCBI-ProteinID:
XP_014899351
Ensembl:
ENSPLAG00000009332
UniProt:
A0A3B3U344
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MSGPGQDSEPEAKVLLIKRLYRAVVESVHKLDVIIGSKSSYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLELQDCIDWTHVTDPLIGRKKPVSASSREMEWAQMACHRCLVYLGDLAR
YQNELAGVEAEQLAERFYHQALSVMPHVGMPFNQLGTLAGSKFYNVEATYYYLRCIQSDT
PFEGAYGNLKRLFDKAAKMYHQVKKQEMKKLSPSRQRSKDIKRVLVSFMYLQSLLQPKNS
LMETELTSLCQSVLEDFNLVLFYLPAPTHGGAPPCPSEEEEEQTQHSDSSYPVLPDNLIF
KMVVTCLMVVHSLKRGGSKQYSASIAFTLALFSHLVNHVNIRLQAELEEGESQVPALHTD
AADDLEVRDMSAAEVDPSEERPLQNGSLEQEDEEDKDEDGRERVRVKKQSSEEDQHKAEE
EKQRQKKKYTRLSRLRRRRCAHKGGQGEDESDLSEGFESEEDEEDDEGGRVRADSTGGTP
VDEPLNPSSVKKETKRDGLGEEGSWESGSEEEEGGTAFDVETDSDMNSQESCSDLEDIED
TENSDSTEGPAREQQEEEVEQPREEGGDRDGEAPPSTNGPLTQSDSSISSNLQAMSSQLF
QSKRCFRLAPTFSNMLLRPQAASGSTPTDTSAPPSQEAPPPPGDSHRDLNPGTANGTNDN
DLDSDSEESQHSAHSEKTLLEKLEILSNQGLMQVVKVFVDWLRTNTDIILMCAQSSQSLW
NRLSVLLNLLPDGSKLLEADLGLNSEVTEMLKECEQPGLSPTLLLPEDVALRHLPALSVA
HRRLDFSRRNASLSPLQECVLRVCCIRSFGHFLTNLQGNVLHFNPEAGIFTSISQSEQDN
LVQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSSMSPYLVPDAAA
LCHHLNLIRHLASSGCFIIIIPRTVIDGLDRLKKENGGARDGIRFLESEFRKGNRYIRCQ
KESGRTFERDKLKRQDIEAWHLYKMVDSCRQLTVSQSNGDEDTAGMVTILTGHEVDELCA
RSAAMKSATQAASSAGMELKNIVEFYRQWKEIG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaccgggtcaggacagcgagcccgaggcgaaagtccttcttatcaagcggctt
tacagggctgtggtggagtctgtgcacaagctggatgtcatcatcggcagtaagtcatcc
tacagagaagtcttcaagccggagaacatcagcctgcggaacaagctgagagagctttgt
gtgaaattaatgtttctgcatcctgttgactacggccgtaaggccgaggagctgctctgg
aggaaggtttactatgaggtcatccaggttatcaagacgaacaaaaagcacatccacagc
cgcagtgccctggagtgcgcctacagaacgcacctcatcgccggcgtgggtttctaccaa
catctgctgctctacatccaatcacattaccagctggagctgcaggactgcattgattgg
acgcacgtcactgatcctctgatcggtcggaagaaacccgtgtcggcctcttctagagag
atggagtgggctcagatggcgtgtcatcgctgtctggtctacctcggagatctggcgcgc
tatcagaatgaacttgctggagtggaagctgagcagctggcagagagattttaccaccaa
gccttgtctgtcatgccccatgttggaatgccttttaaccagctgggaacactggcagga
agcaagttctacaatgtggaagcaacctactactacctacgatgcatccaatcagatact
ccgtttgagggggcctacggcaacctgaagcgtctgttcgacaaagctgccaagatgtac
caccaggtgaagaaacaggaaatgaagaagctgtctccgtctcggcaaagatccaaagac
attaagcgtgtcctggtgagcttcatgtaccttcagagtctactgcagcctaaaaacagc
ttgatggagacggagctgacttcgctctgccagtcggtgctggaggacttcaacctggtt
ctgttttaccttccggctccgacacacggaggcgctccaccctgtccgagtgaggaagag
gaggagcagacgcagcacagcgacagttcataccctgttctgcccgacaacctcatcttc
aagatggtggtcacatgcctgatggtcgtacacagccttaagagaggaggatctaagcag
tacagcgcgtccatagcgtttacgctggctctgttctcccacctggtgaaccacgtgaac
atccggctgcaggctgaactagaggagggggagagccaggttcctgcgctgcacaccgac
gctgcagatgaccttgaagtgagggatatgtcagctgcagaagtggatccgtcagaggag
aggcctctgcagaacggctccctggagcaggaggatgaggaggataaggatgaagatggc
cgtgagcgggtccgagtcaaaaagcagagcagcgaagaagatcagcacaaggcagaggag
gagaagcagagacagaagaagaagtacacccgcctatctcggctgcggcgccgccgctgc
gcgcataaaggcggacaaggggaggacgaaagcgacctgagcgaaggattcgagagcgaa
gaagacgaggaagacgatgaaggagggagggtgcgtgctgactccacaggggggacgcca
gtagatgaaccgctcaacccttcgtctgtgaagaaggagacgaagagggacggcctgggt
gaggaaggcagctgggagagtggctctgaggaagaggagggagggaccgctttcgacgtg
gagactgactcggacatgaacagccaggagtcctgctcagacctggaggacatagaggac
acagaaaactcagacagcaccgagggtccggcccgggagcagcaggaggaagaagtggag
caacccagggaggaaggcggggatcgtgacggcgaggccccgcccagcaccaacgggccc
ctcacgcagagcgactccagcatcagcagcaacctgcaggccatgtcctcccagctcttc
cagtccaaacgctgcttccgcctcgcacccaccttcagcaacatgctgctgaggcctcag
gccgcctcaggctccacccccactgacacctccgccccgccctcccaggaggctccccct
ccgcctggagactcacaccgcgacctgaaccccggcactgccaatggaaccaacgacaat
gacctggactcggactcggaggaaagtcagcacagcgcccacagtgaaaaaaccctgctg
gagaaactggagattctgtccaatcagggcttgatgcaggtggtgaaggtctttgttgat
tggctcaggacgaacacagatataatcctcatgtgtgcacagagttcgcagagcttgtgg
aaccgtctgtcggttctgctgaaccttcttccagacggcagcaagttgctggaggctgat
ttggggctgaactcggaggtgacagagatgttaaaggagtgcgaacagccgggtttgagc
ccgactctgctgctgcctgaggatgtggcgctgcggcacctgcctgcgctcagcgtcgct
caccgccggctggatttcagtcgccgcaacgcctccctcagtcccctgcaggagtgtgtg
ttgcgagtgtgttgcattcgcagttttggccacttcctaacaaatctccaaggcaacgtg
ctgcacttcaaccccgaggcaggaatctttaccagcatcagccaatcggagcaggacaat
ctggtgcagcaggcgaaggcccagttcaggatggcggaagaggaggcccgtcggaatcgt
ttgatgagggacatggcccaacttcgactgcagttggaggtctcgcagctagagggcagc
cttcagcagcccaaagctcagtcgtccatgtctccctacctggttcctgacgctgccgcc
ctctgccatcatctgaacctcatccgacacctggccagcagcggctgcttcatcatcatc
atcccaagaacagtgattgacgggctggatcggctaaaaaaggaaaacggtggtgcaaga
gacgggatccgcttcctggagtcggaattccgcaaaggaaacaggtacatacgttgtcag
aaggagtcgggtcgcacttttgagagggataaactgaagcggcaggacatcgaagcttgg
catctgtataagatggtggacagctgccgacagctgacggtgtcccagagcaacggagac
gaagacacagccggcatggtgaccatcctgacaggacatgaggtggacgagctctgcgct
cggtctgccgccatgaagtcggcgacccaggctgcgtcgtccgcaggcatggagctgaag
aacatcgtggagttctaccgccagtggaaggagatcggctga
DBGET
integrated database retrieval system
