KEGG   Poecilia latipinna (sailfin molly): 106954401
Entry
106954401         CDS       T08005                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03013  Nucleocytoplasmic transport
plai03015  mRNA surveillance pathway
plai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106954401 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    106954401 (rbm8a)
   03015 mRNA surveillance pathway
    106954401 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plai03019]
    106954401 (rbm8a)
   03041 Spliceosome [BR:plai03041]
    106954401 (rbm8a)
Messenger RNA biogenesis [BR:plai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106954401 (rbm8a)
Spliceosome [BR:plai03041]
 Complex C
  Other components
   EJC/TREX
    106954401 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 106954401
NCBI-ProteinID: XP_014899355
Ensembl: ENSPLAG00000009183
UniProt: A0A3B3U0G8
LinkDB
Position
Unknown
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGSRSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttagatcttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgagagcatccacaagctgaaagagaaggccaagaagagaaaaggacgaggcttc
ggcttggaggagggatccaggtccagagctaaagaggactatgatactgtggaacaagat
ggggatgaaccaggtcctcagagatcggtggagggctggatcctgtttgtgactggtgtg
catgaggaggccacagaggaggacatccatgacaagttttcagagtttggagaaatcaaa
aacctgcatcttaaccttgatcgaagaacaggttacctgaagggttacgcactagtggag
tatgagacgtacaaagaagcgcaagcagccatggagggcctcaatggtcaggacctgatg
ggccagactatcagtgtagactgggcgtttgtcagaggacccccgaagaacaagaggagg
ggaggcggacggagacgcagcagaagtccagaccggagacgacgttga

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