Poecilia latipinna (sailfin molly): 106954942
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Entry
106954942 CDS
T08005
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106954942 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106954942 (cstf2)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106954942 (cstf2)
U7-dependent histone pre-mRNA processing factors
106954942 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
106954942
NCBI-ProteinID:
XP_014900279
Ensembl:
ENSPLAG00000011176
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MANVAAATVAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPFGDSVSPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTAVQPLVSSSQGGGAPPVNPPVQPNVQVSQPQP
VPVMHVNGAPQMMQPANMGVVPNMPVPGPVPGPGPGQIGPPGNLQNSPTGSAGPAAIERP
QGPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRAYMAAPPPHQAPPVHIPQMGGGPQ
MGGGPQMGGGPQMGGGPQMGGGPPEMRGPPMPEPRTMMVDPRGPPMMEPRGPPMEPRGRD
PRAMDARGPVAGQRVPMVPGMQGPVSHAMGPNVPPPARPGPGISGVAPSGGGFSPGQSQV
STQDQEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTASGAP
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgttgctgcagctaccgtggccgctgcggccgcagctgccgccgcgaacaga
gacccagccgtggataggtcactacgatcggttttcgttggaaacattccatatgaagcc
acagaagagcagttgaaagacatattctccgaagtcggacttgttgtcagcttcaggtta
gtgtatgacagagagacaggaaagccaaagggatatggcttctgtgaataccaggaccag
gaaacggccctcagtgccatgaggaacctgaacgggagagagttcagtggtcgggctctc
agagtcgacaatgcagctagcgaaaaaaataaagaagagctcaaaagtctgggcaccgga
gcccccatcatcgagtctccttttggagacagtgtgtcgccagaggaggctccagagtcc
atcagcagagctgtggcgagtcttccacctgagcagatgtttgagttgatgaaacagatg
aagctgtgtgtacaaaacagcccccaggaggcgagaaacatgctgctgcagaacccgcag
ctggcctacgctctgctgcaggcgcaggtggtgatgcggatcgttgacccggagatcgcc
ttgaaaatgttgcatcgtcaaacagctgttcagccgctggtgtccagcagtcagggtgga
ggagcaccgcctgtcaatcctccggttcagcccaacgtgcaggtgtctcagccacagcct
gtgccggtcatgcatgtgaatggagcccctcagatgatgcagcccgccaacatgggcgtt
gtccccaacatgcctgtaccgggccctgtaccaggacccggacccggacaaatcggacct
ccaggaaacctacagaattcccccacaggatcagccggacccgccgctatcgagcggcct
caagggccgggcggtatcccacccagaggcctgttaggcgatggacccaatgatcccaga
ggaggaactctgctgtctgtcaccggagaggtcatcgaccccaaccgggcctacatggcc
gctccgccgccccaccaggctccgcccgtacatatacctcagatgggaggcgggccacag
atgggaggcggacctcagatgggaggcggacctcagatgggaggcggacctcagatggga
ggcgggccacccgaaatgagaggccctccgatgcctgagccacggaccatgatggtggat
ccacgagggccgccgatgatggagccgcggggaccaccaatggaacccagaggccgtgac
ccgagggcgatggacgctcgcgggccggtggcgggtcagagggttcccatggtgcccggg
atgcagggcccggtctcccacgccatgggtccaaacgttcctccgcctgcaagaccgggt
ccgggtatttctggcgtcgcgccctcaggaggaggcttcagtcccggccagagtcaggtc
tccactcaggatcaggagaaggccgccctcatcatgcaggtcctgcagctgaccccggag
cagatcgccatgctgccgccggagcagcggcagagcatcctcatcctcaaggagcagatt
cagaaaaccgcctctggcgctccgtga
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