KEGG   Poecilia latipinna (sailfin molly): 106956035
Entry
106956035         CDS       T08005                                 
Symbol
nfasc
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai04514  Cell adhesion molecule (CAM) interaction
plai04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:plai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    106956035 (nfasc)
   04517 IgSF CAM signaling
    106956035 (nfasc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:plai04515]
    106956035 (nfasc)
Cell adhesion molecules [BR:plai04515]
 Immunoglobulin superfamily
  L1 family
   106956035 (nfasc)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 Ig_VEGFR-1-like_5th Bravo_FIGEY V-set C2-set_2 FN3_DSCAM-DSCAML_C Ig_4 Ig_6 Ig_PDGFR_d4 Fn3_PBP1 Fn3_ROS1 BiPBP_C TrbL_4
Other DBs
NCBI-GeneID: 106956035
NCBI-ProteinID: XP_014902048
Ensembl: ENSPLAG00000022034
LinkDB
Position
Unknown
AA seq 1403 aa
MRPVGRREMLGKVGHAALTLLSLLLLWQEAAAIEVPLDPKIQQDLKQPPTIIKQSVKDYI
VDPRDNTIIIECEAKGNPMPIFLWRRNGRLFNIGKDPRVTMRKRSGTLEVGFHNGGRPED
YEGEYQCFASNELGMALSNKILLRVSKAPLWPKEVLAPVQVVEGSPLVLTCNPPPGLPPP
LIFWMDSNMTPIHQDRRVSMGLNGDLYFSNVLVQDGQKDYSCNARFNFTYTIQQKNPFNL
KVQTTEPYNDTSYNASDPFGGRKIAETSPSFLTPEGSGSFKMVLRDEQLLLECIAAGLPT
PSIKWFKRGGDLPAQKVKFQNFNKTLKILSVSEEDAGEYVCMADNRLGSIRHSINVQVKA
APYWLDKPTNLVLAPEENGRLVCRANGNPKPNIQWLMNGEPINKITETPTSTNREVLGDT
ILFRGVQIGSSAVYQCNASNQHGYLLANAFVSVLDMAPRMLGPKNQLIKVVMNNRTFLNC
PFFGSPLPELRWFKNGQGSGLDGGQYRAYINGTLEIKRARKEDEGIYTCVANNMLGNAEN
QVQLEVKEPTRIIQAPTYQSVLRGSKATFHCKVVSDPSLPITVNWSKDGERLDLGWRLKK
DEESLTIPSVSENDEGIYTCTVKSEIDQDSASARLTVSEDTFHNPSVFSTLPPDRPDPPI
DLDLSDPLARSVRLTWIPGNDRRSPVTEFLVQFEENHWEPGRWRNLSSYPGDLNSVILQL
APNVNYQFRVIAINSVGWSQPSQPSPRYKTTAAPPDAIPRDLRGWGSNKDNMELTWEPLR
DLEKNGPNLQYNVWWRRKDSGDDWTNVTTSETKYVVHHTETYVPYEIKIQARNDLGSGPE
SNIVIGYSGEDKPTDSPTELRVSKVGSTRANIHWKPVDLSSVQGEFKEYRLYYWRESSLV
PGLVVSKEKKTTGFYTTVPEPSGILKDLVPYSKYKMFMVVANSRFESLPSNNVEFTTAEG
VPDAPRFFRINRRSLDTLYLEWGKPLEPNGILIGYQLVYQRVNGSRLGPQQFETFRPNMT
DFILRLPDRSARYKFSLSALTKVGMGEVYAEESPLFTNEAENFTDATDVVELTDATLSSV
SPPTPTPLPSLPPLPPTTIPPTTISITTPTPPPTTPPPPPTTTTTEATTPSTVPVLVTTK
RVDQNVLVTPRWEIWSLTVVANSYYADVNWSHNFPADSKFTLEVTLDFNKTVAVEKEKQP
PVNLKALIAGEMYHLRVYSQELNSVSKSVTFQTKAAHIDQVDIATQGWFIGLMCAIALII
LILLIVCFIKRSRGGKYPSSGFLTGFTKYLVRDKKDLPLDPVDQKDQDGSFDYQNGSSVR
DRNENENSSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKD
KDETEGNESSEATSPVNAIYSLA
NT seq 4212 nt   +upstreamnt  +downstreamnt
atgcgaccagttggaaggagagaaatgttgggaaaggttgggcatgcagccctgacgttg
ctgtcattactgctgctgtggcaggaagcggcagccatcgaagttcctctagatccaaag
atccagcaagacttgaagcagccccccaccataatcaaacagtcagtgaaggactacatc
gtcgaccccagagataacaccatcatcatagagtgtgaagccaagggtaacccaatgcca
attttcttatggaggaggaatgggaggttgttcaacattggcaaagaccccagagtgact
atgagaaaacgctcaggaaccctggaggtagggttccataacggaggacgaccagaggac
tacgagggagagtaccagtgtttcgcctcaaatgagctcggaatggccctgtccaacaaa
atactgctccgcgtctccaaggccccgttatggcctaaggaagtgctggccccggtgcag
gtggttgaaggctcccctctggtcctaacctgcaacccaccgcctggcctgcctcctcca
ctcatattctggatggacagcaacatgacccccatccatcaggacaggagggtttccatg
ggtctgaatggagacctgtatttctccaatgttttggtccaagatggtcaaaaagactac
agctgcaacgctcgcttcaacttcacatataccatccagcagaagaaccccttcaacctc
aaagttcagaccacggagccatataatgacacatcttacaatgcctctgatcccttcggt
ggccgcaaaatagcagagacgtcgccgtctttcctgactcctgaagggagtgggagcttc
aaaatggtgctacgagatgagcaattgctgctggagtgtatcgctgctgggcttccgact
ccttccatcaagtggtttaagagggggggagacctgccagcacaaaaggtgaagtttcag
aactttaataagactctgaaaattctcagtgtgtcagaggaggatgctggggagtatgtc
tgcatggcagacaaccgtctgggcagtatacgccattccatcaatgtccaagttaaagct
gctccttactggttagacaaacccacaaacctggtgctggccccagaggaaaatggccgc
ttggtgtgtcgagccaatggcaaccctaagcccaacatccagtggcttatgaacggcgag
ccaataaacaagatcacagaaactccaacaagtacaaacagagaagttctcggtgacacc
attctgttccgcggggtgcagatcggaagcagtgcggtctaccagtgcaacgcctccaac
cagcacggctacctgctggccaacgccttcgtcagtgttctcgacatggctccacggatg
ctgggacccaaaaatcagttaatcaaagtcgtcatgaacaaccgaaccttcctcaactgc
cctttctttggctctcctttacccgagctgcgctggtttaagaatggccagggcagtggg
ctggatgggggtcagtaccgggcctacatcaacggcaccctggagataaaacgcgctcga
aaggaggatgagggcatctacacctgtgtggctaacaacatgttgggcaacgctgagaac
caggtccagctggaggtcaaagagcctactcgtataattcaagctcccacgtaccagtca
gttttgaggggctctaaagctaccttccactgtaaggtggtgtcggaccccagccttccc
atcacggtgaactggtcaaaggacggagagcgcctggatctgggatggaggttgaagaag
gatgaagagtccctgactattccgtctgtcagtgagaacgatgagggaatttacacctgc
actgttaaatctgagatagaccaggactcggcctcagcccgcctcactgtctcagaggac
accttccacaacccctcagtctttagtaccttgcctccagaccgtccagacccaccaata
gatctggatctgtcagacccgttagcccgtagtgttcgcctcacctggattcctgggaac
gaccgcaggagccctgtcacagagttcttggtccagtttgaggagaaccactgggagccg
ggcagatggcggaacctgtcctcttaccctggagacctcaactctgtcatcctgcagctt
gcccccaatgtcaattatcagttcagggtcattgccattaactcagtgggttggagtcaa
cctagtcagccctcacctcggtacaaaaccactgcagcacccccagatgccatccccaga
gacctacgtggttggggatccaataaggacaacatggagctcacctgggagcctctgcgc
gatctggagaaaaacggcccaaacctgcagtacaacgtgtggtggagacggaaagactcc
ggggacgactggaccaacgtgaccacgtctgagaccaaatacgtcgttcaccacactgaa
acatatgtgccttacgagataaaaatccaggccaggaatgacttgggatcaggacccgag
tctaacatcgtcattggatattctggagaagacaagcccactgattcacccactgagctg
cgggtgtcgaaggttggcagcaccagagcaaatatccactggaagcctgtagatctgagt
tctgtccagggggagttcaaggagtacagattgtactactggcgcgagtccagtctggtt
ccagggctggtggtgagcaaggagaagaagaccactggattctacacgactgtgccagaa
ccgtccgggattctcaaagacttggtgccctactctaaatataagatgttcatggttgtg
gctaacagtcgctttgagagtctacccagcaacaacgtggaattcaccactgcggagggc
gttcccgatgctcccaggttcttcaggattaaccgcagaagtctggacacactctacttg
gaatggggcaaaccattagaacccaacggcattctaattggataccaactcgtataccag
agagtgaacgggtccagactgggtccccagcagttcgagacgttccgtcccaacatgaca
gactttatcctgcgcctgccggaccggtccgctcgctacaagttcagcctgtcagcgctc
accaaggtgggaatgggagaggtctatgccgaggagtcgccgctctttaccaatgaagca
gaaaactttactgatgctacagatgtagttgagcttacggacgccaccctgtcttctgtt
tcccctcctactcccactcctcttccttcccttcctccccttcctcctactaccatccct
cccacaacaattagtattacaactcctacccctcctccaacaacccctcctcctcctcct
actactactaccactgaggcaactacaccctccacagttcctgtgctggtcaccaccaag
cgagttgatcagaatgtcttggtaacccctcggtgggagatctggagtctgacggtggtc
gccaacagttactacgcggacgtcaactggagtcacaacttcccagctgacagcaagttt
actctagaggtcactctggacttcaacaaaacagtggcagttgaaaaggagaaacagccg
cccgttaatctgaaggctctgatcgctggtgaaatgtaccatctgagggtttactcccaa
gagctcaacagcgtcagcaaatctgtcacctttcaaactaaagcagctcacatagaccag
gtagacatagccactcagggctggttcattggcttgatgtgtgccattgccctcattata
ctgatcctcctcattgtctgcttcatcaagaggagtcgaggaggcaaatacccaagttcc
ggcttcttgactggtttcacaaaatacctcgttcgtgacaaaaaagatcttcccctggat
ccagtggatcagaaagatcaggatggatcctttgattaccaaaatggttcatctgtccgc
gacaggaacgaaaatgaaaacagcagcgacgaggacaacaagcctctgcagggcagccag
acttcgctggacggcaacgtgaaggagagcgacgacagcctcgtggactacggcgaaggc
ggcgacggccagttcaacgaggacggctccttcatcggccagtacacagtgaagaaggac
aaggacgagacggagggaaacgagagctccgaggccacctctcctgtcaatgccatctac
tcgctggcgtag

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