KEGG   Poecilia latipinna (sailfin molly): 106956043
Entry
106956043         CDS       T08005                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03420  Nucleotide excision repair
plai04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106956043 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106956043 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plai04121]
    106956043 (ercc8)
   03400 DNA repair and recombination proteins [BR:plai03400]
    106956043 (ercc8)
Ubiquitin system [BR:plai04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106956043 (ercc8)
DNA repair and recombination proteins [BR:plai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106956043 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_RIG_1st WD_LRWD1 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 106956043
NCBI-ProteinID: XP_014902088
Ensembl: ENSPLAG00000021968
UniProt: A0A3B3W027
LinkDB
Position
Unknown
AA seq 401 aa
MLGFLSARQAGVDDPLRLRRAESTRRVLSLKLNPDRDVDRIHGNGINTIDIDAIEGRYML
SGGADGVIVIYDLENHSGKQQYTCRPVRTVGRSSRHVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLAVRWSPRYENILATASADSKVNIWDVRRASGSLFTLDQHNGEKSKASSQA
ENTAHNGRVNGLCFTSDGLYLLTTGTDDRMRLWNSATGKNTLVNYGKVCNESRKRLQFSV
SHGCSPEFVFVPCGSSVAVYALHTGELITMLRGHYNNVDCCEFHPDYQELYSGGKDGNLL
SWVPVVRTADVEEEPNGENKVAVGLSAVNPAFQDNWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttgggattcttatcagcaagacaggccggtgtggatgaccctttgcgacttagacgt
gctgagtcaacgagaagagtcctcagtctgaagctaaatcccgacagagatgtggaccgg
attcatggaaatgggattaataccattgacattgatgcaattgaaggcagatatatgttg
tctggaggggcagatggagttattgtcatctatgacctggagaaccacagtgggaaacaa
cagtacacctgccgacccgtccggactgttggaaggtcaagtcgacatgtccacaaattc
agtgtggagacagttcagtggtatccttatgacacgggaatgtttgtgtctagttccttt
gacaagaccatgaaagtgtgggacacagagactttaaagccagctgaagtgtttgagttt
gaggggaatgtctacagtcaccacctgtcgcccattgccaggaagcatagtctcatcgca
gttggtaccaaaaaccctaaaattcaactttgtgacctgaagtctggttcacggatccac
gttcttcagggtcacagagcagaagtgctggctgtgcggtggtcgccaagatacgagaac
atcttagcaactgccagtgcagacagcaaggtgaacatttgggatgtgcggcgagcttca
ggtagtcttttcactttggatcagcacaacggagagaagtcgaaagcctcgtcacaggca
gaaaacacagcccataacggcagagtgaatggtctgtgttttacttctgatggcctctac
ctcctaaccaccggcacagatgaccgcatgaggctatggaatagcgccacagggaaaaac
acgctggtgaattatgggaaggtctgcaatgagagccgtaaacggctgcagttctccgtg
tctcacggctgcagcccagagtttgtgtttgtgccgtgcggcagctcggtggcggtgtac
gctctgcacacaggagaactgatcactatgctgcggggtcactacaacaacgtggactgc
tgcgagtttcacccagactaccaggagctgtacagcggaggtaaagacggtaacctgctg
tcgtgggtacccgtcgtccgtaccgcagacgtggaagaagagcccaatggtgaaaataag
gttgctgtcggcctttctgctgtgaaccctgcctttcaagacaattggagcagcgatgaa
gattaa

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