Poecilia latipinna (sailfin molly): 106956916
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Entry
106956916 CDS
T08005
Symbol
sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plai03000
]
106956916 (sox1)
Transcription factors [BR:
plai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106956916 (sox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
SelP_N
Motif
Other DBs
NCBI-GeneID:
106956916
NCBI-ProteinID:
XP_014903514
Ensembl:
ENSPLAG00000012948
UniProt:
A0A3B3VLJ5
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHAGGGGGGPAGKVPQERIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSSPGVGMGGGQRLESPGAGHVGASAGYASHVNGWANGTYSGQVAA
AAAAAHAMMQEAQLAYTQHPGSGAHPHHHPHHHHHPHHHPHNPQPVHRYDMSALSYSPIS
NSQSYMSASPPGYGGITGYTHQHQSSGVSPVSGAIGGTLGSLVKSEPSVSPPVSTGRAPP
PCPTGDLRDMISMYLPTGEAAGGDSVQSRLHVLHPQHYQSGGSAAVNGTVPLTHI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttgcattcccccgtggtgccccagaccaaccca
tccaacccgggcggacatgcgggaggaggaggcggggggcccgcagggaaggtcccccag
gagaggatcaagagacccatgaacgccttcatggtgtggtcccggggccagcggaggaaa
atggcacaggagaaccccaagatgcacaactcagagatcagcaagcggctgggcgcggag
tggaaggtgatgaccgaggcggagaagagacccttcatcgacgaggccaagcggctccgg
gccatgcacatgaaggaacacccggactacaagtaccgcccgcggaggaagaccaagact
ctactcaagaaggacaagtactcacttgccggcggactcctcggttcatcgccgggtgtg
gggatgggcggcgggcagcggctggagagccccggagcgggacatgtgggggccagcgcg
ggctacgcctcgcatgtgaacggctgggcgaacgggacgtactcgggtcaggtggcggcc
gcagcggcggcggctcacgccatgatgcaggaggcgcagctggcgtacacccaacacccg
ggcagcggggctcacccgcaccatcacccgcaccaccaccaccacccgcatcaccacccg
cacaacccgcagccggtgcacaggtatgacatgagcgctttgtcttacagcccgatctcg
aactctcagagctacatgagcgcctctccgccgggctacggcggcatcaccggctacacc
caccagcaccagagctccggggtctcccccgtgtccggggccatcggagggactctgggt
tcgctcgtgaaatcggagccgagcgtcagcccgcccgtttccacggggcgcgcaccgccg
ccgtgccccacgggagacctgcgggacatgatcagcatgtatctgcccactggcgaggcg
gcgggcggcgactccgttcaaagcagactgcatgtgctgcacccgcagcactaccagagc
gggggctccgctgcggtgaacgggacggttcccctcacgcacatttaa
DBGET
integrated database retrieval system
