Poecilia latipinna (sailfin molly): 106957109
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Entry
106957109 CDS
T08005
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106957109
03036 Chromosome and associated proteins [BR:
plai03036
]
106957109
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106957109
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106957109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
106957109
NCBI-ProteinID:
XP_014903818
Ensembl:
ENSPLAG00000006992
LinkDB
All DBs
Position
Unknown
AA seq
1869 aa
AA seq
DB search
MEEKKKKRQEEKTKKEITQKKASDQKPKVPEPVPTKPSPGSSHHLQPSSPTLPLSSFSTS
SSGNGKGPPCGSQVLTQSPPLQQCHLSSASGRYPPREVPPRFRQQEHKQLLKRGQPLPAG
AFGALTLPPSSPSSSPSASLSSSATTQNSATSATSKHKPDISLLSSSGAQYEKSHWGTSV
PVDGPSSANNWDKVIIDGSDTDAWPSIKHNIDSGQPSNPECSLGSASSNLDTSAVASRSR
SGLLSMAAGATGQQAHYNSLKPNGTMMTGPVSTSTLAASRGWGSDGKQDGMNGGRVAAPS
NWGSPNFNLNLNPNANPSAWPVLGHEGGTGGVNGPSSSSLPPGIHGNGNVGNGNADTGGG
SWVSMISGNDNDQQHLSTNKNLSFNMEPGNLNTDGPNYTKQQQAQEPMSPIHGLTGWGGH
SPTESSQLSGDTTGSSVWGGGENKPTESPKDSGWDSSPSGGLSAWGRQGSGGGSSGSGGW
GDWGKSSGGGDISKGWDSVDPGNSGPGQDQQMSSWGKQSGTAPASEDSGDSSEGRSQCRD
RSSSMEFAPLLPRQDLDPRVLSNSGWGQTPIRQHTVWEMEEANSDDGKSTSSSDTMACSS
SNGGPSSTNGGAINPNIGPSQRPGSGGKMDSEGSSSSGWGAPPPQPIQTGSGWGDPPLSA
TKAPNGTACGWGPTSGPKNEDSSSWGSDEKSSSWDDGMMKNKPSSWGEGPKNSHSWGNSN
GASSGSTTGEWGASDMKKNSSSSSMWEGEGSNGESSGWNESPRGGIRGGGSWGKPTPAVS
NSNWGETPRANGPVQGGWGSAKPQESSSSGSSTGSGGCVSIGSWGCPGSVKQSNPGWGNV
SKQEPGMEPTGWEEPSPPSIRRKMEIDDGTSTWGDPNAYSKTVNMWDRNNPNNNPGNSGP
PPSKNGAVAMINNNNNHSHHMHHHSHHGQPPSHMLHQGNNNGSPNNAASHPSGGPQGRPP
LANPGWGELPSVQPKPEPAWGEPAAPTSAVDNGTSAWGKPPGGVGGWGDGGHEPPGPYVR
SNGHTGSAPCKSGPKPMQDGWGNGEEMSMSTSQWDTEDGDVWNSPTSQDSGSSCNSWGNG
PKKCPSKGKIGSKQDEAWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMTALLEKKT
DLDKRGLGMSDYSNGMNKTLVCRPSALSKDPSDRNTFLDKDGVLSDDAPPSPFLPSPSLK
LPLANSSLPGQGLGQGNPGLAMQNLNNRQIPNGMFGGNGAAQTRAMQQQQPPQPPVPPLG
SSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQ
RLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQALLMKQQQLPSHSS
SSSSSAGLHPPGGPAGVPGSGKSTLDPFAGPHQAPGLADTLHTKEPPSSPNAYSTYPLSG
LNPNMNVNGMDVGGLSLKEPPQPQSRLSQWTHTNSMDNLTGNSSNLENNFNNKHGVISAA
STLGPPGKPPQLEDSYSPYNLISNSESPSSPLVPPDNWGQGKSPNEKISNGANINWPPEF
CPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRNGGKLTEMKSTWSP
GPIAQSQASLSHELWKVPQGPRSTTAPSRPPPGLTNTKPSSTWGGSSLGLAQGWSATYSS
EGTTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSK
DEAAKAQKSLHMCVLGNTTILAEFAGEEDVNRFFAQGQSLGATTTSWHANPGSNQNRMGG
ASQSHSIGQWSSGGGGGGSKASGSDLLWGGVPQYSSLWGPPNGEDARVIGSPTPINTLLP
GDLLSGESM
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaggcaagaagaaaagaccaagaaggaaatcactcagaaa
aaggcttctgatcagaaaccgaaagtgccagagcctgtccccactaagcccagtcctggt
tcatctcaccacctccaaccctccagccccacgctgcccctctcctccttctccacctct
tcttctggcaatggcaagggccccccatgtggtagccaggtcctgactcagagccccccc
ctgcagcagtgccacttgtcctctgccagtggccgctatccgcccagagaggtgcccccg
cgcttccgtcagcaggagcacaagcagctactgaagagaggccagccgctgcccgcagga
gccttcggcgcgctcaccctccctccttcctctccctcctcttcgccctcagcgtctttg
tcgtcatccgctacgacccaaaactctgccacgtccgctacaagcaaacacaagccagac
atatccctactgagcagctctggtgcccagtatgagaagtctcattggggcacttcagta
cctgttgacggaccttccagtgccaacaattgggacaaagtgatcattgacggaagtgat
acagacgcttggccatccattaagcataatattgactctggccagccatcaaacccagaa
tgctccttgggctcagctagctctaacttagacaccagtgctgtcgcttctagaagtagg
agtggtcttctgagtatggccgcaggtgccactggccagcaggcccactataactctctc
aaaccaaacggtaccatgatgacgggacctgtgtcaaccagcacgttagcagctagtaga
ggctggggttcagatgggaaacaagatggcatgaatggtggaagagtagcagcccccagt
aactggggatcaccgaattttaacttgaacctcaaccccaatgccaacccatcggcctgg
cctgtcttgggccatgaaggtggtacgggaggtgttaatggacccagctcttcgtccctc
ccaccaggcatacatggaaatggaaatgtgggaaacgggaatgcggacactggtgggggg
agttgggtcagcatgataagtggtaatgacaatgatcagcagcacctttcaaccaacaaa
aacttatctttcaatatggagcctggtaaccttaacactgatggaccaaactacactaaa
caacaacaagctcaggagcctatgagccccatccacggtcttactggctggggtggtcat
tcacccactgagtcttcccagctcagtggggacacaacaggcagctctgtgtggggtgga
ggagaaaacaagccaacagagtctccaaaagactcgggctgggactcatctccctctgga
ggcctttctgcctggggccgccaaggcagtggtggtggaagtagtggcagtggtggctgg
ggagactgggggaagtcctctggaggtggggatatatccaaaggctgggactcggtggat
cctggtaattctggtccaggccaggatcagcaaatgagttcatggggcaaacaatcagga
acagctccagcgagtgaggatagcggagacagcagtgaagggcgatcccaatgcagagac
aggtcctccagcatggaatttgcccctctgctcccccggcaggacctagacccccgagtg
ctgagtaactcgggttggggacagacccccatccggcagcacactgtgtgggagatggaa
gaagccaattctgatgatgggaagagcactagcagctcagacaccatggcatgctccagc
tctaatggtggaccctcatcaaccaatggaggtgctattaacccaaacattgggcccagc
cagaggcctggatctggaggaaaaatggacagtgaaggatcatcctcctctggttggggc
gctcctccaccgcagccgattcaaactggatcaggatggggggaccccccactttcagca
accaaagccccaaatggcacagcatgtggctggggacctaccagcggtcctaaaaatgag
gacagctcatcctggggttccgatgagaagtcatctagctgggatgatggcatgatgaaa
aacaagcctagcagctggggagaaggccccaaaaactcccatagctggggcaacagtaat
ggggcttccagtggttctaccacaggtgagtggggggcctcagacatgaagaaaaatagt
tcctccagcagcatgtgggaaggagaaggaagcaatggagaaagcagtgggtggaatgaa
agcccgagaggaggaatcagaggaggtgggagctgggggaaacctactcctgctgtgagc
aacagcaactggggagagaccccacgtgccaatggtccagtgcagggaggctggggctct
gcaaagccccaggaaagcagcagcagtggcagcagcactggtagtggaggatgtgtcagc
attggttcctggggttgtcctggctcagtgaagcaaagcaaccctggctggggaaacgtt
agcaagcaggagccggggatggagcccaccggttgggaggagccctcccctccctccatc
cgccggaagatggagatcgatgatggaacatcaacttggggtgatcccaacgcctacagc
aagaccgtcaacatgtgggatcgcaacaatccaaataacaacccaggcaacagcggcccg
ccacccagcaagaatggtgcagtagcaatgatcaataataacaacaatcactctcaccac
atgcaccaccattctcaccatggccagcccccaagtcacatgctgcaccaaggaaacaac
aatgggtcaccaaataatgctgcctctcatccgtctgggggaccccagggtagaccgccc
cttgcaaatccaggttggggagagcttcccagtgtccagcccaagccggagcctgcgtgg
ggagagccagcagctccaacttcagctgttgacaatggtacatctgcttgggggaaaccc
ccaggtggtgttggaggatggggagacggtggccatgagccacctggcccttacgtgagg
tcaaatggacacacaggttctgcaccttgcaaatcaggccccaaacctatgcaagatggc
tggggaaatggagaagaaatgagcatgtctaccagccaatgggatactgaggatggggat
gtatggaacagtcccacatcgcaggacagcggttcctcatgtaattcctggggcaacgga
cccaaaaagtgtccaagcaaggggaagatcggcagcaagcaagatgaggcttggatcatg
aatcgtctgattaaacagctcactgacatgggctttccgagagaccctgctgaggaggct
ttgaagagcaacaacatgaaccttgaccaagccatgactgctctcttggagaagaagaca
gacctggacaagcggggtttggggatgtctgactacagcaacggcatgaacaagacccta
gtgtgtcggccctccgctctctccaaagacccctctgaccgcaacacatttcttgacaag
gatggcgtcctgtcagatgacgctcccccatcaccatttttgccttcccccagcctgaag
ctccccctggccaacagtagccttcctgggcagggtttgggacagggcaatccggggctg
gccatgcaaaacttgaacaacagacagatacccaatggaatgtttggcggtaatggagca
gcacaaacccgggccatgcagcagcagcagcctcctcagccaccagtgccacctctcggc
tcctcccagcctagtctacgtgctcaagtgcctcagtttctttcccctcaggtccaagca
caactcttgcagtttgcagcaaaaaacattggtcttaaccctgcacttttaacctcacca
ataaaccctcaacaaatgaccctgttgtaccaacttcagcaactgcaaatggcataccag
cgtttacaaatccagcagcagatgatgcaggcgcaacgcaatgtgtccggccccattagg
caacaggagcagcaagttgcacgtacaatcaccaacatgcagcagcagatccagcagcac
cagcgtcagctgtaccaggcgctgctgatgaagcagcagcagcttccctcgcattcctcc
tcgtcctcctcatccgccggtctgcacccccctggtggccctgctggagttcctggctcc
ggaaaatcaaccctggaccctttcgcaggcccacaccaggctccgggcctcgctgacaca
ctgcacaccaaagagcctccgtcttcgcccaatgcctacagcacctaccctctttctgga
ctgaatccaaacatgaatgtaaatggcatggacgttgggggtctgtccctgaaggagccc
ccccagccccagtctcgcttgtcccagtggacacacactaactctatggacaacctcact
ggcaattcttcaaatttggagaataacttcaataataagcatggtgtcatatctgctgcc
tctacccttggacccccagggaagcccccccagctggaggactcgtacagcccttacaat
ctaatctctaactcagagtcccccagcagccccctggtgcctcctgacaactggggccaa
ggcaagagccccaatgaaaagatctcaaatggggccaacattaactggcctccagagttc
tgcccaggtgtgccatggaagggccttcagaatattgaccctgagaatgaccccaacatg
acccctggcagcgtccccagcggtcccaccatcaacacaaacatccacgatgtcaaccgc
tacctgctgcgggacaggaacggaggcaaactgactgaaatgaagtctacctggtccccg
gggcccattgctcagagccaagcctctctgtcgcatgagttgtggaaggttcctcagggc
ccgcgcagcaccacggccccctcccggcccccgcctggtctcaccaacaccaagccctcc
tccacctggggcggcagctcgttgggactggctcaaggctggagtgccacttactcctct
gagggaaccacatggagcaccgacagctccaacaggaccagcagctggctggttctgagg
aatctcaccccacagatcgatggctcaactctgaggaccctgtgcatgcagcacggtccc
ctgatcacattccatctcaacctgactcaggggaatgctgtggtgcgctacagctccaag
gacgaggccgccaaggcccagaagtccctgcacatgtgtgtgctcggaaacaccaccatc
ctggcagagttcgccggggaggaggacgtcaaccgcttctttgcacaaggccagtcgctg
ggggcaaccaccacgagctggcacgccaacccaggaagcaatcaaaatcggatgggcggg
gcctcccagtcccactcgattggccagtggagcagtggcggcggcggcggtgggagcaag
gccagcgggagcgacctgctgtggggcggagtcccccagtactccagcctgtgggggccg
cccaacggagaggacgcccgcgtgatcgggagccccacccccattaacaccctgctgcct
ggagatctgctgagcggagagtccatgtag
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integrated database retrieval system
