Poecilia latipinna (sailfin molly): 106957503
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Entry
106957503 CDS
T08005
Symbol
exosc7
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106957503 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106957503 (exosc7)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106957503 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106957503 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106957503
NCBI-ProteinID:
XP_014904366
Ensembl:
ENSPLAG00000016410
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEVETDVVSNTDGSAKVTLGHTAVLV
GIKAEIGKPRPMVANEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNQHSLD
LKSLCISPGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISSVEEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKIGHRHVVDATLQEXACSVASLIISVTHKGIITCSR
KVGRGSLDPESICEMIETGKRVGKALHPPLMKLLQQEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtgcaagtcagcgaggctgagaaagtttacatcctacacggaatacgggat
gatttacgggtggatggtagaggctgtgaggactacagacacatggaagtagaaacagat
gtggtgtccaacactgacggatccgctaaagtcactctgggtcacactgcagttctggtt
gggatcaaggctgagatcggaaaaccgaggccgatggttgcaaacgagggatacctggag
ttcttcgttgactgctcagccaatgcaaccccagagtttgagggcagaggcggtgaagag
ctggggacggagctgagtaacaccctctacaaagtcttcaacaaccagcacagcttggat
ctgaagagcctctgcataagtcctggcgagcactgctgggtgctttatgtggacgtgttg
cttcttcagtgtgatgggaatttgtacgacgccatttcagtagcgatcaaagctgctctc
ttcaacacaaaaattcccagagttcacatctcatccgttgaggaaggagggaaggagatc
gagctctctgacgacccgtacgactgcatgagactcgatgtggaaaacgttccctgcata
gtgactttatgcaagatcggccacagacacgtggtggatgccaccctgcaggagtaggcc
tgctctgtggcgagcctcatcatctccgtcacacacaaaggaataatcacctgcagcagg
aaggtggggagaggcagcctggacccagagagcatctgtgagatgatagagacaggaaaa
cgagtaggaaaagctctccaccctcctctcatgaagctgctgcagcaggaggagagtctg
ggcaagaagaggcagaaagtcggattccttggataa
DBGET
integrated database retrieval system
