Poecilia latipinna (sailfin molly): 106957913
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Entry
106957913 CDS
T08005
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plai04040
]
106957913 (trpc1)
Ion channels [BR:
plai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106957913 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
106957913
NCBI-ProteinID:
XP_014904968
Ensembl:
ENSPLAG00000006910
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MHISAWPYSLSVVMAALYQGTDTSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAVSPPLLQKLMQRIQNPEYSTTMDVAPVILAAHRNNYEIL
TMLLKQDISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPIL
RAFELSADLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSDDHV
DKRGLMEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMGTVL
SLALLWPLLSICYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNM
MGPPLEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFTLRIV
AHSKFKNCKNDTDTSTPERKDWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQ
ISMGQMLQEFGKFLGLFLLVLFSFTIGLTQLYGKDYAKETKGQSNQTKDCEGIFCQQQSN
DAFHTFMGTCYALFWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLL
VAMLHKSFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPLNVLTSPKTVCYLVTSLRKW
ICSHTTKGKVKRQNSLKEWKNLKQKHDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENL
NDLRQDLSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcgctctccgtcgtaatggcagctctttaccagggc
acggacacctcctcccccgacaaattcctggccttgaaagacgtgagagaagtaaaagag
gagacgacgctggacgagaagctcttcctgctggcatgcgagaaaggtgactattacatg
gtgaagaagctgctggaggagaaccgccatggggagctcaacgtcaactgtgtggatgtg
ctgggccgggacgcggtgaccatcaccatcgagaatgaaaacctggacatcctgcagctt
ctgctcgagcacggctgccaggccacagatgccctgctagtggccatagactcggaggtt
gtgggtgccgtggacatcctcctcaaccacagaccaagacgctcctccaagccctctatc
gctgtaagtcccccgttattgcagaaactgatgcagcggatccagaacccagagtactcc
accaccatggatgtggctcctgttatcctggcagcgcacagaaataattatgagatcctc
accatgctgctaaaacaggacatctccctccctcggcctcacgctgtaggctgcgagtgc
atgctgtgcaatgctaaaaacaagaaggacagcttaaggcactccaggttccgactcgac
atctaccgctgcctggcgagcccctcccttatcatgctgaccgaggaggaccccatactg
cgagcatttgagctgagcgcagacctgaaggagctcagccttgtcgaggtcgaattcagg
aatgactacgaagagctggcgaaacagtgcaagatgtttgccaaggatcttctggctcag
gctcgaaactctcgagagctggaagtgattctcaatcacacctccagcgacgatcatgtc
gacaagaggggcctgatggaggagcgcatgaaccttagccggcttaagctagccatcaag
tacaaccaaaaagagttcgtggctcagtccaactgtcagcagttcctcaacaccgtctgg
tttggagagatggccagctaccgacggaagcacacctgtttgaagatgggcacggttctg
agcctggcgctgctctggccgctcctctccatctgctacctgctggtgccccgctcccga
gtcggccagataatccacacgccgttcgtgaagttcatcatccacagcgcctcttatttc
accttcctgctgctgctcaacctgtactctctggtctacaatgagggcaagaagaacatg
atgggccccccactcgagatgattgattacctgctgatcctctggatcataggaatggtg
tggtcggacgtgaaacgtttgtggtacgaagggctggaagactttctggaagagtccagg
aaccaactgagttttgtgatgaattctctctacctggcaaccttcactcttagaatagtt
gctcatagcaagttcaaaaattgcaaaaatgatacagacacatccacaccagagaggaag
gactgggacgccttccatcccatcctggttgccgagggcctcttcgcctttgccaacgtt
ctgagttacctgagactcttcttcatgtacaccaccagctccattctggggccactgcag
atctccatgggtcagatgctgcaggagtttgggaagttcctgggcctcttcctgcttgtg
ttattctccttcaccattgggctgacccagctctatggaaaagactacgctaaagaaaca
aagggccagagcaatcaaaccaaggactgtgagggcatcttctgccagcaacagagcaac
gatgcatttcacacgtttatggggacctgctatgctctgttctggtacattttctccttg
gcgcacgttgcgctcttcgtcacccgcatcagctacacagaggagctgcgctcctttgtt
ggtgccctgatcataggcacctacaacatcgtggtggttatcgtgctgaccaagctgctc
gtggccatgctccataaaagcttcagacaaattgctaatcatgaggataaggagtggaag
tttgcacgggccaaactgtggctcagctactttgacgacaagtgcaccctgccccctcct
ctcaatgtcctaacctcgccaaaaaccgtctgctacctggtgaccagcctgaggaagtgg
atctgctctcacaccacaaagggcaaagtgaagagacagaacagtctcaaggagtggaag
aacctgaaacagaagcatgacgagaactaccagaagatcatgtgctgtctggtacaccgc
tacctgacctccacgcggcagaagatgcagagcatggatcaagccacggtggaaaatctg
aacgacctacgccaagacctgtccaagtttcgcaatgagatgagggacctgctgggcttc
cggacatccaaatatgccatgttttacccaaggagttaa
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