Poecilia latipinna (sailfin molly): 106957925
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Entry
106957925 CDS
T08005
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03013
Nucleocytoplasmic transport
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106957925 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
106957925 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106957925 (thoc2)
03041 Spliceosome [BR:
plai03041
]
106957925 (thoc2)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106957925 (thoc2)
Spliceosome [BR:
plai03041
]
Complex C
Other components
EJC/TREX
106957925 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106957925 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
106957925
NCBI-ProteinID:
XP_014904985
LinkDB
All DBs
Position
Unknown
AA seq
1558 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGNETKDIQAALYEVCSQVVQGNLKI
DLVSAVLGEMMELRDDLPSILADVFCILDLETGALEEKNKRDHYTHLVGACLSFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSNLVLESIKSLIGCFNLDPNRVLDIILEVYESRSEQDEFFLSLIKSYMCEPITLC
HILGFKFKFYQEPNEETPKSLYHIAAALLNHKLIELEDLYVHLMPVDATIVEEHKREISE
AKQIARKLVTVVLPSEKSEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTMEPLYRRAGVPKGAKGCALQPLQNKRAPQPTESFE
DLRKNTFSMLCYLGPHLSHDPILFAKIVRLGKSFMKEYQTDSRPEVKDKMEILLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSGHPLLVKVKAQTV
ERARYIMKRLTKENIKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTLSLWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDVLCNQFHTPHDAAFFLSRPMYAHQILSKYEELKKAEKGNRQQQKV
TKYVAACEQVMTPVHEAVMSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KAQIKAIEENSEIPLNKKKKEKERCTALQEKLQEEEKKQMEHVQRVLHRLKLEKDSWLLT
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSNRAVYEKECANYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEA
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKDQPARSATPSSQQNGPG
SAGKPAANTSKTEEGGFEDGDRVKDKSQGTTKPVNKANSTAAKVTTSNGNGALNSTKAVK
DDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERLLREGKEKTPKADREKV
KLDEKSGKDDKAKAGNGEPVEPARDAVKESKNKEKGDRNAAIATLKSPNPRSDSAESERD
HKRRKLDSHSSPSHSSSVKDSSNELKDPATKQHINFNSVARSKSREREVEKKDTESVQGR
SKEKKEEKERKERKRDHAVNDREASQESKRRKDENGTNSSKNSQSTSPSCDSPLTPEKEK
TKRSKSSSKEKAESAKAERTSSGGKKESRHDKSEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccccggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gaatttgtgcaactctgcaaagagctaacagagaaaactgatcatgggaatgaaactaaa
gacatacaggccgctctttatgaggtctgctcgcaggttgtccagggtaacctgaaaatt
gatctcgtttccgctgtcctcggggaaatgatggaactcagagatgatttgccatcgatt
ttagcagatgtgttctgtatattagatttagaaactggcgcactagaagaaaagaacaag
cgggaccattacactcatttagtgggagcctgtttgtcttttgtaccggaggccatcctg
aaagaacgactcgacccggagaccttggaatctctcggattgataaaacaagctcatcag
tttaatcaaaagattgtaaaaatcaagactaagctattttacaaacagcagaagtttaac
ttgctaagggaggagaacgagggctacgccaaactgatcacagagctcggccaagaccta
tccggcaacatcaccagcaacctggtcctggagagcatcaagtccctcataggctgcttc
aatttggaccccaaccgggttttggacatcatcttggaggtgtatgagagccggtctgaa
caagatgagttctttctgtccctcatcaagtcctacatgtgtgagccaatcaccctctgc
catattctgggctttaagttcaagttctaccaggaacctaatgaggaaactccaaagtca
ctttaccacattgctgctgctctcctgaaccacaagctgatagagctggaggatctctat
gttcatcttatgccagtagacgccaccattgtagaagaacacaaacgggagatttcagag
gccaagcagatcgctcgcaagctggtgacagtcgtgctgccctcggagaaaagcgaagac
aaggagaaggagaaagaaaaggaagaagaaaagaacgagaagccacctgacaaccagaag
ctcggtcttctggaggctctgctcaggattggagactggcaccacgcccagagcatcatg
gaccagatgccgtctttttatgctacttctcacaaggccatcgcgctggcgctttgtcaa
cttgtacacctgaccatggagcctctttacagaagagccggcgttccgaaaggagcgaag
ggctgcgcgctgcagccgctgcagaacaagcgggctcctcagcccaccgagagctttgag
gatctacggaaaaatacgttcagcatgctctgctacctgggcccccacctctcccacgac
cccatcctctttgccaagatagtccgactgggcaagtccttcatgaaagagtatcaaacc
gacagtagacctgaagtgaaagataagatggagatactgctgagctgcttcctgagcatc
gcagaccaggtgctgctgccctctctctctctaatggagtgcaacgcctgcatgtctgag
gaactgtggggcctgtttaagctctttccctaccagcacaggtaccggctttatgggcag
tggaagaacgagacctactccggccatccactgctggttaaagtaaaagcccagactgtg
gaaagggccagatacattatgaagcgcttgaccaaagagaacataaaacagtctggacgg
cagatcggcaaactgagccatagcaaccccaccatcctcttcgattacatgttgtctcag
atccagtggtacgacaacctcattgttccggtggtggactcattgaaatacctcacatct
ctcaactacgacgtcctggcctattgcatcatcgaagctctggccaatcctgagaaggag
aagatgaaacatgatgacactaccctctccttgtggcttcagagtttggcgagtctgtgt
ggagccgtgttcagaaagtacccgattgaattggccggcctgctgcagtacgttaccaac
cagctgaaggcgggaaaaagttttgacttgctgattctgaaggaggtggtgcagaaaatg
gctggcattgagatcacagacgaaatgacttcagaacagttggaggccatgacaggagga
gagcagctgaaagccgagggcggctacttcggccagatcaggaacacaaagaaatcttct
cagcgcctgaaggacgctctgctcgaccacgagctggcgctgccgctgtgtttactcatg
gcccagcaacgaaatggagtcgttttcctggagggaggagagaagcatctgaaactcgtg
gggcacctttacgaccagtgtcacgacactctggtgcagtttggtggctttttagcctcc
aacctcagcacagaggattatataaagcgagttccctccatcgacgtcctctgcaaccag
tttcacaccccgcatgacgccgctttcttcttgtcgcgccccatgtacgcgcatcagatc
ttgtcaaaatacgaggagctaaagaaggccgaaaaaggcaaccggcagcagcagaaggtc
accaagtacgtggcagcgtgcgaacaggtgatgacgccggtgcacgaggccgtgatgtcg
ctccacccggccagagtctgggacgacctgcggcctcagttctacgccaccttctggtcg
ctcaccatgtacgacttggccgtgccgcacgccgcgtatgagcgggaggtcaacaagctg
aaggcccagatcaaggccatcgaggagaactctgagatacctttaaataagaagaagaag
gagaaggaacgttgcacagccctgcaggaaaagctacaggaggaagaaaagaaacaaatg
gagcacgtccaaagagttctgcaccgcctcaagctggaaaaagacagctggttgttaacc
aaatccacgaagaacgagaccataacgaagttcctgcagctgtgtctgttccctcgctgc
atcttctcctccatcgacgccgtgtactgcgcccgcttcgtcgagctcgtccaccagcag
aaaacccccaacttctgcacgctcctctgctacgacagggtcttctctgccatcatttac
acggtggccagctgcacagagaacgagtcccaccgctacggccgcttcctctgctgcatg
ttggaaacggtgacccggtggcatagcaaccgcgccgtctacgagaaggagtgcgcgaat
tacccaggcttcctgacaatcttccgagccacagggtttgacggaggaaacaaagcggat
cagctggattatgagaactttcggcatgtggtccacaaatggcactatatgctgactaaa
gcttcagtccactgcctggaaacgggagattacacccacatccggaacattctgatcgtg
cttaccaagatcctaccctgctacccaaaggtcctgaacctgggccaggcgctggaggcc
cgggtccacaagatctgccttgaagagaaggataagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaacgagttc
caccacaaggaccagccagctcgcagcgccacgccgtcgagtcagcagaacggccctggg
agcgccggcaagcccgccgccaacaccagcaagaccgaggaggggggatttgaagacggg
gaccgggtcaaggataaatctcaggggaccacaaagccagtcaacaaagccaacagcaca
gcagccaaagtgaccaccagcaatgggaacggtgctctcaacagcaccaaagctgtgaaa
gacgacaaagagaagagcgggaaagaaaaaaaagaaaagaaagagaagacaccaggtagc
actccagagacaaaggcggagaaccgcagggagaagcagagagacgaaagagcgggaaag
gaggagcggttgctgcgcgagggtaaggagaagaccccgaaagcagaccgggagaaagtc
aagctggacgaaaagagcggcaaagacgacaaggccaaagccggaaacggggagccagtg
gaaccagccagagacgccgtcaaggaatccaagaacaaggagaaaggagacaggaatgct
gcgatcgcaaccctcaagtcaccaaatccgagatccgattcggccgaatctgagagggat
cacaaaagacgaaagctcgacagtcactcgtccccatcccactcctcatctgttaaggac
agtagcaacgaactcaaggatcctgcaaccaagcagcacatcaactttaattcagttgcc
cggtccaagagcagagagagggaagtggagaagaaagacacagagagcgtacaaggccga
tccaaagagaagaaggaggaaaaggaacggaaagagagaaaacgagatcacgccgtcaac
gaccgcgaggccagccaagagtccaagcggaggaaggacgagaacggcaccaattcctcc
aaaaacagccagagcacgagtccttcctgcgactctcctctgacgccggagaaggagaag
accaagagatccaagtcctcgagcaaggagaaggccgagtccgcgaaagccgaacgaacg
tcttccggaggcaagaaggagtccagacatgacaagtctgagaagaaggagaagagggac
agcgctggagggaaggaggagaaaaagcatcataagtcgtctgacaagcacagataa
DBGET
integrated database retrieval system
